Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH15Q96QU1 AC068339.2-201ENST00000534395 618 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 OR4U1P-201ENST00000554958 912 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 AC090695.1-201ENST00000561269 1222 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 AL645944.1-201ENST00000603857 493 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 AC022079.2-201ENST00000619739 566 ntBASIC2.13□□□□□ -2.07
PCDH15Q96QU1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.13□□□□□ -2.07
PCDH15Q96QU1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH15Q96QU1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCDH15Q96QU1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDH15Q96QU1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 RNU2-37P-201ENST00000410695 177 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 NDUFA5P10-201ENST00000432147 357 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 HMGB1P48-201ENST00000446155 598 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL627224.1-201ENST00000448334 444 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC025459.1-201ENST00000504072 156 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 HAUS1P3-201ENST00000523909 662 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MTCO2P22-201ENST00000603246 681 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL359198.2-201ENST00000611836 194 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 U6.48-201ENST00000618523 106 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL512643.1-201ENST00000635735 524 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 DCAF13P1-201ENST00000495256 1330 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 SNORD21-201ENST00000383953 95 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC073310.1-201ENST00000423226 1033 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 ELOCP6-201ENST00000429066 328 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 YWHAZP8-201ENST00000436935 731 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 ELOCP12-201ENST00000458706 328 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC072039.1-201ENST00000477611 581 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC012181.1-201ENST00000479895 423 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 RNU6-295P-201ENST00000516901 104 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 RNU6-889P-201ENST00000517189 103 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC012182.1-201ENST00000570133 895 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MIR4458-201ENST00000578872 75 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC069304.3-201ENST00000603938 1084 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AL022099.1-201ENST00000604551 712 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 RNA5SP108-201ENST00000605921 117 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MTND5P28-201ENST00000438005 1594 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 AC011460.1-201ENST00000636268 1834 ntBASIC2.12□□□□□ -2.07
PCDH15Q96QU1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AL355578.1-201ENST00000607405 1328 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 RNU6-152P-201ENST00000384037 107 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 RNA5SP213-201ENST00000391031 106 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 RPL21P2-201ENST00000440049 481 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 RPL23AP33-201ENST00000442301 452 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC146507.1-201ENST00000468335 354 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 MTCO1P30-201ENST00000515244 580 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 OR11H5P-201ENST00000554039 926 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 RPL23AP88-201ENST00000605759 454 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 AC006065.5-201ENST00000623427 349 ntBASIC2.11□□□□□ -2.07
PCDH15Q96QU1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDH15Q96QU1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 RNA5SP189-201ENST00000364920 115 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 RNA5SP167-201ENST00000365461 116 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 DEFA7P-201ENST00000382676 285 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 PRELID3BP11-201ENST00000414230 479 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 NEK4P1-201ENST00000433383 879 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC004866.2-201ENST00000438285 481 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC093392.2-201ENST00000450682 337 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 HMGB3P15-201ENST00000507326 574 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AP003467.2-201ENST00000520175 319 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AP004242.1-201ENST00000533701 349 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms