Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.9□□□□□ -1.78
NEK1Q96PY6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEK1Q96PY6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEK1Q96PY6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
NEK1Q96PY6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
NEK1Q96PY6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 RNU6-600P-201ENST00000362524 99 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 RNU6-1214P-201ENST00000363650 109 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 SNORA38.1-201ENST00000364172 131 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 RNU1-33P-201ENST00000364249 162 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 ARF4P3-201ENST00000397387 509 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 RPL31P1-201ENST00000398116 372 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 SKINT1L-201ENST00000401057 817 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 HMGN1P24-201ENST00000412282 298 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 HMGB1P12-201ENST00000438594 598 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 MTCYBP11-201ENST00000447254 1109 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 RPL39P6-201ENST00000448289 150 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 RPL7P38-201ENST00000488396 739 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 MTCYBP35-201ENST00000503630 1137 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC093767.1-201ENST00000504523 156 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC021678.1-201ENST00000505195 936 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 RPL12P22-201ENST00000519073 490 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC004024.1-201ENST00000549244 247 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC009712.1-201ENST00000564938 316 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AL354943.1-201ENST00000572103 781 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AL162713.1-201ENST00000604480 262 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC069304.2-201ENST00000605154 435 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC006270.3-201ENST00000605967 1036 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 HMGN2P28-201ENST00000606102 262 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC097520.1-201ENST00000624435 385 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEK1Q96PY6 ZNF833P-201ENST00000424938 1494 ntBASIC3.9□□□□□ -1.79
NEK1Q96PY6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NEK1Q96PY6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 SNORA51.2-201ENST00000364595 132 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 SNORD82-201ENST00000365530 70 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 RNU6-157P-201ENST00000383957 107 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL024474.1-201ENST00000404655 591 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL590103.1-201ENST00000434488 307 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 CST9LP2-201ENST00000437612 320 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 ISCA1P2-201ENST00000438679 421 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 MTND2P20-201ENST00000440805 661 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 ANKRD26P4-201ENST00000455755 950 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL139824.2-201ENST00000458731 1095 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 PABPC1P3-201ENST00000469174 459 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC108078.3-201ENST00000502633 489 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 OR5H5P-201ENST00000503164 928 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC104090.1-201ENST00000506341 1171 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 MTCO3P44-201ENST00000510977 541 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 RN7SKP244-201ENST00000516513 307 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC090136.1-201ENST00000520009 240 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC104027.1-201ENST00000521887 300 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 OR5AK1P-201ENST00000524837 922 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 DUXAP1-201ENST00000556632 463 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC087465.1-201ENST00000560574 245 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms