Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-1032P-201ENST00000384100 107 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 HMGB1P11-201ENST00000413899 637 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AL589765.3-201ENST00000446084 462 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 RPL21P18-201ENST00000469899 480 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC067805.1-201ENST00000559344 470 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CFAP54Q96N23 SNORD21-201ENST00000383953 95 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 Y_RNA.433-201ENST00000384089 102 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 NDUFB4P5-201ENST00000415445 361 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 ZNF542P-204ENST00000482727 1305 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 SSXP1-201ENST00000453640 473 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 PSMA6P4-201ENST00000603247 718 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 AC008568.2-201ENST00000623862 2313 ntBASIC1.88□□□□□ -2.11
CFAP54Q96N23 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CFAP54Q96N23 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CFAP54Q96N23 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CFAP54Q96N23 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 RPL7P46-201ENST00000425129 740 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC011712.1-201ENST00000588959 234 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC103988.1-201ENST00000566382 2177 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC244033.1-201ENST00000426826 870 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 HAR1A.1-201ENST00000459583 118 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 RFPL1S-203ENST00000539579 330 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 AL160394.1-201ENST00000624765 724 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 MIR6767-201ENST00000637302 66 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 RNY1P4-201ENST00000384595 115 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 Y_RNA.681-201ENST00000516445 113 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.87□□□□□ -2.11
CFAP54Q96N23 MIR6132-201ENST00000622083 109 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 RPL23AP61-201ENST00000623642 466 ntBASIC1.87□□□□□ -2.11
CFAP54Q96N23 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CFAP54Q96N23 AC012078.1-201ENST00000405035 1646 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 RNU6-37P-201ENST00000362692 107 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 RNU6-11P-201ENST00000364234 107 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AL161670.1-201ENST00000554348 137 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 RNU1-51P-201ENST00000365345 176 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 RN7SKP123-201ENST00000410732 291 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AL391646.1-201ENST00000603860 190 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 AC244517.12-201ENST00000623581 663 ntBASIC1.86□□□□□ -2.11
CFAP54Q96N23 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
CFAP54Q96N23 AC005336.3-201ENST00000623833 2679 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 SNORA31-201ENST00000362607 130 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 MTCO3P31-201ENST00000405526 789 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 ARPC3P1-201ENST00000437218 533 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 IGHV3-76-201ENST00000522465 295 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 AC010678.1-201ENST00000614118 713 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms