Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX27Q96L92 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX27Q96L92 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX27Q96L92 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX27Q96L92 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX27Q96L92 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 AC092104.1-201ENST00000497346 1441 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX27Q96L92 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNX27Q96L92 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNX27Q96L92 FGF7P2-201ENST00000332473 296 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RNU6-989P-201ENST00000362756 107 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RN7SKP44-201ENST00000363602 316 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RNU6-263P-201ENST00000363811 107 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RNU5E-5P-201ENST00000365379 116 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 Y_RNA.559-201ENST00000384686 107 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RNA5SP56-201ENST00000410277 118 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 RPS7P13-201ENST00000413955 498 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC127526.1-201ENST00000417526 366 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX27Q96L92 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 AL691449.1-201ENST00000426570 421 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX27Q96L92 MTND1P28-201ENST00000435623 950 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX27Q96L92 RPL7P36-201ENST00000444633 681 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 USP9YP29-201ENST00000445112 563 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX27Q96L92 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX27Q96L92 CBX3P3-201ENST00000508108 532 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX27Q96L92 AC093677.1-201ENST00000514414 678 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 OR4P1P-201ENST00000530808 1136 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AP003385.6-201ENST00000531603 374 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX27Q96L92 GNRHR2P1-201ENST00000555315 631 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC107954.1-201ENST00000565906 727 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC025627.2-201ENST00000576220 160 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC012213.3-201ENST00000577199 777 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AL669831.4-202ENST00000590817 238 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 AC146944.4-201ENST00000602697 718 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AL451044.1-201ENST00000604867 238 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AL031666.3-201ENST00000609320 1006 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 AC010678.1-201ENST00000614118 713 ntBASIC4.39□□□□□ -1.71
SNX27Q96L92 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX27Q96L92 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX27Q96L92 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX27Q96L92 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 ZNF285B-201ENST00000561698 1767 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AL365361.1-201ENST00000566942 3481 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 SNORD35B-201ENST00000363660 87 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 MIR1261-201ENST00000408659 82 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 MIR1183-201ENST00000408856 89 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX27Q96L92 RNU4-78P-201ENST00000410940 126 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 MTCYBP24-201ENST00000420387 1106 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC109583.1-201ENST00000432156 268 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 TBCAP1-201ENST00000436520 327 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 snoU13.8-201ENST00000458890 104 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 COX7A2P2-201ENST00000505291 250 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AC012417.1-201ENST00000582307 1039 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX27Q96L92 MIR4769-201ENST00000584126 77 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AC006504.3-201ENST00000586818 523 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX27Q96L92 AL606490.9-201ENST00000603331 271 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AP000254.1-201ENST00000609934 520 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AL596245.1-201ENST00000618994 362 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 MIR6500-201ENST00000622700 86 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms