Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NIP7P2-201ENST00000485801 544 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC055855.1-201ENST00000489563 579 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 SEPT14P4-201ENST00000513445 186 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC015795.1-201ENST00000513669 327 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 FO082796.1-201ENST00000523795 183 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AP001781.1-201ENST00000530977 207 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 ARL2BPP2-201ENST00000550907 489 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC007424.1-203ENST00000554613 687 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AL512782.1-201ENST00000603093 364 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AL139395.1-201ENST00000603662 160 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AL354984.3-201ENST00000604803 325 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AC012603.1-201ENST00000606424 528 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 AL596245.1-201ENST00000618994 362 ntBASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHAMP1Q96JM3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ZNF137P-201ENST00000456718 1920 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 Y_RNA.234-201ENST00000364409 97 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 RNY4P16-201ENST00000364768 94 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 SNORA69-201ENST00000383895 132 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 RNU6-1207P-201ENST00000384343 107 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 Y_RNA.548-201ENST00000384656 105 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP171-201ENST00000391071 115 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 snosnR66.1-201ENST00000391095 99 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 SNORA74C-2-201ENST00000411179 201 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 BX510359.2-201ENST00000417920 305 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 SDCBPP3-201ENST00000419629 891 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC016691.1-201ENST00000441321 413 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC093019.1-201ENST00000443135 252 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ABCF2P2-201ENST00000450549 296 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 MTCO2P29-201ENST00000465212 189 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC010486.1-201ENST00000511793 424 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 SNORA40.12-201ENST00000516329 111 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 IFITM8P-201ENST00000522529 394 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 RPS3AP23-202ENST00000574601 686 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC245389.1-201ENST00000605141 529 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 AC024940.5-201ENST00000622889 474 ntBASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHAMP1Q96JM3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC105074.1-201ENST00000623380 3095 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AP000756.2-201ENST00000624168 2567 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 Y_RNA.72-201ENST00000362894 103 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 U3.22-201ENST00000391120 215 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 RPL31P52-201ENST00000407532 367 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP39-201ENST00000411245 120 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC006548.1-201ENST00000427470 102 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC008850.1-201ENST00000427546 362 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 snoU13.24-201ENST00000458998 104 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms