Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 VN1R74P-201ENST00000613259 503 ntBASIC2.67□□□□□ -1.98
APH1AQ96BI3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
APH1AQ96BI3 AC093875.1-201ENST00000623688 504 ntBASIC2.67□□□□□ -1.98
APH1AQ96BI3 AC080188.3-201ENST00000624842 748 ntBASIC2.67□□□□□ -1.98
APH1AQ96BI3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.67□□□□□ -1.98
APH1AQ96BI3 AC091948.2-201ENST00000636510 279 ntBASIC2.67□□□□□ -1.98
APH1AQ96BI3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APH1AQ96BI3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.67□□□□□ -1.98
APH1AQ96BI3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APH1AQ96BI3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.67□□□□□ -1.98
APH1AQ96BI3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
APH1AQ96BI3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 RPL23AP57-201ENST00000332361 466 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 MIR128-1-201ENST00000384921 82 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 RPL22P22-201ENST00000395439 379 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 BMS1P22-201ENST00000414726 313 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AL137014.1-201ENST00000420490 1226 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 RPL27AP8-201ENST00000424277 446 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 RPL23AP58-201ENST00000440453 469 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 RFC5P1-201ENST00000454419 874 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC093278.1-201ENST00000494700 600 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC010625.1-201ENST00000511296 403 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APH1AQ96BI3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 OR10V3P-201ENST00000525712 725 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 NUTF2P8-201ENST00000604593 363 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AP003973.1-201ENST00000604639 691 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC091946.2-201ENST00000606105 291 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 CYCSP41-201ENST00000616920 296 ntBASIC2.66□□□□□ -1.98
APH1AQ96BI3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
APH1AQ96BI3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
APH1AQ96BI3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
APH1AQ96BI3 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 U3.6-201ENST00000363622 211 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 SNORA51.4-201ENST00000364993 124 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 RNU6-657P-201ENST00000383904 107 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 RNU6-878P-201ENST00000384578 110 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 RNU6-882P-201ENST00000391025 103 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 ATG3P1-201ENST00000419507 911 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 RPL35AP12-201ENST00000425362 338 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 MTCYBP32-201ENST00000427945 1084 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 YWHAZP7-201ENST00000436906 631 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AL031183.1-201ENST00000457667 207 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC117440.1-201ENST00000474107 571 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 RPS29P2-201ENST00000479278 136 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC027309.2-201ENST00000520566 192 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC090502.2-201ENST00000549267 280 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC005000.2-201ENST00000605468 310 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AP000238.1-201ENST00000608759 426 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC231759.1-201ENST00000616455 597 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC090617.7-201ENST00000623952 126 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
APH1AQ96BI3 AC087359.1-201ENST00000508335 1740 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 ZNF833P-201ENST00000424938 1494 ntBASIC2.65□□□□□ -1.99
APH1AQ96BI3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APH1AQ96BI3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
APH1AQ96BI3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.64□□□□□ -1.99
APH1AQ96BI3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APH1AQ96BI3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APH1AQ96BI3 SUGT1P1-201ENST00000379514 476 ntBASIC2.64□□□□□ -1.99
APH1AQ96BI3 RNU6-468P-201ENST00000384003 109 ntBASIC2.64□□□□□ -1.99
APH1AQ96BI3 SNORA46-201ENST00000384762 135 ntBASIC2.64□□□□□ -1.99
APH1AQ96BI3 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
APH1AQ96BI3 AL031121.1-201ENST00000406553 254 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms