Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 CR848007.1-201ENST00000442354 1699 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL359893.1-201ENST00000447628 1580 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC012618.3-205ENST00000637896 1496 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RNU6-181P-201ENST00000363225 107 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 MIR192-201ENST00000384915 110 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC011933.1-201ENST00000413334 321 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL391219.1-201ENST00000422570 483 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RPS12P5-201ENST00000423449 371 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC019097.1-201ENST00000424783 735 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL138785.1-201ENST00000425821 331 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 MTCO2P19-201ENST00000427513 598 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 ELOCP14-201ENST00000428070 331 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 OR51AB1P-201ENST00000429046 620 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC087650.1-201ENST00000431445 468 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 HMGB1P31-201ENST00000437242 427 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 ELOCP7-201ENST00000439968 331 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL662791.1-201ENST00000441992 928 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 NFU1P2-201ENST00000448700 469 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC104308.1-201ENST00000454621 333 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC133473.1-201ENST00000455173 299 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RPS29P33-201ENST00000456717 146 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC116533.1-201ENST00000459748 321 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RPL37P6-202ENST00000464216 403 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RPL29P14-201ENST00000495837 428 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC099522.1-202ENST00000514718 367 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 RNU6-445P-201ENST00000516949 107 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AP000907.2-201ENST00000530827 353 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 MIR5684-201ENST00000585074 65 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL391646.1-201ENST00000603860 190 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AP000907.4-201ENST00000604143 237 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC007363.1-201ENST00000604736 620 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AL009028.1-201ENST00000604895 802 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC004853.1-201ENST00000604902 698 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC006338.1-201ENST00000618453 749 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC012150.2-201ENST00000621300 544 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 AC079597.1-201ENST00000624306 508 ntBASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4AQ8WYN0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC011460.1-201ENST00000636268 1834 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 OR5J1P-201ENST00000313544 939 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RNU4-1-201ENST00000363925 141 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RNA5SP509-201ENST00000364577 119 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RNU6-282P-201ENST00000365357 103 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RNU6-339P-201ENST00000384310 107 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 BTF3P10-201ENST00000433415 495 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC112653.1-201ENST00000443851 386 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC009963.2-201ENST00000453431 138 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 RPS20P24-201ENST00000457473 361 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 snoU13.1-201ENST00000459157 104 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC010587.1-201ENST00000505809 469 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC108475.1-201ENST00000507880 950 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC074344.1-201ENST00000512823 224 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC005798.1-201ENST00000513715 387 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC107934.1-201ENST00000522215 217 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AP003497.1-201ENST00000528472 562 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC109635.3-201ENST00000529536 185 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms