Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 SNORD51-201ENST00000384320 80 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 MIR3074-201ENST00000384885 81 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RNA5SP332-201ENST00000391063 115 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 FGF7P8-201ENST00000402994 292 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RPL26P29-201ENST00000415623 438 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 HMGB3P20-201ENST00000417997 600 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC092832.1-201ENST00000422934 400 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC019097.1-201ENST00000424783 735 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 OR51AB1P-201ENST00000429046 620 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 FTH1P6-201ENST00000430768 320 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 UBE2V1P13-201ENST00000436983 439 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 HMGB1P31-201ENST00000437242 427 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AL662791.1-201ENST00000441992 928 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 USP9YP15-201ENST00000442391 422 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC112653.1-201ENST00000443851 386 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RPS20P24-201ENST00000457473 361 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RPS27AP17-201ENST00000463344 455 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 MTCO2P29-201ENST00000465212 189 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC017037.1-201ENST00000508460 471 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 Y_RNA.693-201ENST00000516641 110 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AP000827.1-201ENST00000527814 258 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC109635.3-201ENST00000529536 185 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AP000907.2-201ENST00000530827 353 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AL352979.3-201ENST00000553515 247 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC084783.1-201ENST00000565846 910 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC060771.1-201ENST00000582031 164 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AL357078.3-201ENST00000607528 618 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC006338.1-201ENST00000618453 749 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 LRRC77P-213ENST00000637727 880 ntBASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCHCR1Q8TD31 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC090229.1-201ENST00000590983 1609 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 EIF2AP4-201ENST00000424793 1781 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 Y_RNA.409-201ENST00000383990 98 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR129-1-201ENST00000384972 72 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR3065-201ENST00000390137 79 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AMD1P2-201ENST00000412936 992 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 EIF1P3-201ENST00000423841 334 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 Z95327.1-201ENST00000446082 482 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 NFU1P2-201ENST00000448700 469 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 RPS29P33-201ENST00000456717 146 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 snoU13.1-201ENST00000459157 104 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC023194.1-201ENST00000493084 308 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC105914.1-201ENST00000511798 226 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 RNU6-27P-201ENST00000516146 107 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 RN7SKP234-201ENST00000517173 224 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 PTP4A1P6-201ENST00000531034 478 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AL161713.1-201ENST00000555538 145 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR3146-201ENST00000580367 79 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 RPL12P25-202ENST00000598100 674 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 BNIP3P30-201ENST00000601184 574 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AL355812.1-201ENST00000603215 216 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR6891-201ENST00000618788 93 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR7703-201ENST00000620784 77 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AP000346.3-201ENST00000622821 210 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MIR1321-201ENST00000637766 79 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms