Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 OR4A45P-201ENST00000529954 901 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 SNRPGP18-201ENST00000553000 214 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC018926.3-201ENST00000618841 406 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AL109659.3-201ENST00000624985 950 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 MTND5P28-201ENST00000438005 1594 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RNU6-650P-201ENST00000365658 111 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RPS20P25-201ENST00000412447 352 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 HMGB3P31-201ENST00000413333 595 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC010881.1-201ENST00000433830 235 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC026436.1-201ENST00000510537 270 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 RNA5SP445-201ENST00000515889 115 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 AC048347.1-201ENST00000624621 427 ntBASIC3.19□□□□□ -1.9
COL22A1Q8NFW1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 Y_RNA.140-201ENST00000363474 103 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 RNA5SP88-201ENST00000365560 109 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 RNU6-1005P-201ENST00000384519 107 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 PNRC2P1-201ENST00000423940 420 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 LINC00888-204ENST00000487386 421 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AC112673.1-201ENST00000513168 575 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AC026616.1-201ENST00000523157 525 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AC107871.2-201ENST00000612894 502 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 AP003400.6-201ENST00000624698 740 ntBASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL22A1Q8NFW1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 RNU6-543P-201ENST00000362576 108 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 DSTNP4-201ENST00000399472 474 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC073310.1-201ENST00000423226 1033 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC092170.1-201ENST00000440211 356 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 HMGN2P21-201ENST00000447764 270 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 VN1R17P-201ENST00000472048 1090 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 RPL9P33-201ENST00000484311 566 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC008885.2-201ENST00000509506 930 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 RNU6-362P-201ENST00000516736 90 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 OR5D17P-201ENST00000531492 978 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 MIR6733-201ENST00000635723 61 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 AC068620.4-201ENST00000636730 1182 ntBASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL22A1Q8NFW1 GABPAP-201ENST00000419271 1356 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 SEPT7P7-201ENST00000420492 1301 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 AC011460.1-201ENST00000636268 1834 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 YWHAZP8-201ENST00000436935 731 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 AC018634.1-201ENST00000437554 401 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 Z77249.1-201ENST00000444622 1175 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 HSPE1P18-201ENST00000517602 280 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 AP001207.1-201ENST00000524051 481 ntBASIC3.16□□□□□ -1.9
COL22A1Q8NFW1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms