Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 USP9YP20-201ENST00000419224 558 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RPL7P46-201ENST00000425129 740 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 NEK4P1-201ENST00000433383 879 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 UBE2V1P5-201ENST00000440070 405 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC092798.1-201ENST00000458542 409 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 SNORA31.11-201ENST00000516528 139 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNU4ATAC3P-201ENST00000516699 126 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 IGLVIV-66-1-201ENST00000521832 460 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC011604.1-201ENST00000545978 196 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AP004372.1-201ENST00000604842 844 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 CU459211.1-201ENST00000635667 749 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNA5SP189-201ENST00000364920 115 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNU1-101P-201ENST00000391171 127 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL591704.1-201ENST00000432574 275 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC117525.1-201ENST00000515228 503 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC145207.9-201ENST00000623802 325 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 CYP3A51P-201ENST00000633513 256 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 MTND5P6-201ENST00000422338 1798 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC099654.7-201ENST00000635788 2127 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC107398.1-201ENST00000486904 505 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 TBCAP3-201ENST00000512475 312 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC096644.4-201ENST00000563417 2912 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC090740.1-201ENST00000623193 2262 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNU6-253P-201ENST00000384730 105 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC108120.2-201ENST00000512973 294 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 FRG1DP-201ENST00000635586 771 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNU6-457P-201ENST00000363999 107 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RPL23AP47-201ENST00000408017 460 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNU6-233P-201ENST00000410845 141 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 PRELID3BP11-201ENST00000414230 479 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 HAR1A.1-201ENST00000459583 118 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC008571.1-201ENST00000467232 300 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 LINC00888-204ENST00000487386 421 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC103710.2-201ENST00000609912 942 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC009318.2-201ENST00000610917 651 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNY1-201ENST00000364228 113 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNU7-27P-201ENST00000459281 62 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RN7SL297P-201ENST00000483161 293 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RPS29P11-201ENST00000496507 171 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 MTND5P4-201ENST00000514978 288 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL590410.1-201ENST00000617925 333 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNA5SP181-201ENST00000410246 98 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL445646.1-201ENST00000431784 216 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC104629.2-201ENST00000468627 598 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RNA5SP182-201ENST00000516064 82 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL136981.2-201ENST00000617319 734 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL109809.4-201ENST00000603520 2185 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 DPH3P2-201ENST00000422618 250 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AP000705.1-201ENST00000454567 350 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 RPL21P103-201ENST00000479921 488 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AP003385.6-201ENST00000531603 374 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC021269.2-201ENST00000532318 330 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AC092159.4-201ENST00000624944 550 ntBASIC0.7□□□□□ -2.3
SYNE1Q8NF91 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE1Q8NF91 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC0.69□□□□□ -2.3
SYNE1Q8NF91 API5P2-201ENST00000397055 1498 ntBASIC0.69□□□□□ -2.3
SYNE1Q8NF91 MIR592-201ENST00000384959 97 ntBASIC0.69□□□□□ -2.3
SYNE1Q8NF91 MIR92A2-201ENST00000385299 75 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms