Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC005539.1-201ENST00000443768 1479 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 OR5BR1P-201ENST00000524992 1330 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SNORD9-201ENST00000362566 104 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SNORD51-201ENST00000384320 80 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 ATP5A1P2-201ENST00000412323 255 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 ATG3P1-201ENST00000419507 911 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 YPEL5P1-201ENST00000419731 367 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC007742.1-201ENST00000425789 329 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MTATP6P4-201ENST00000427725 675 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MTCYBP45-201ENST00000435243 565 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 ELOCP26-201ENST00000436067 329 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 Z95327.1-201ENST00000446082 482 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC115115.1-201ENST00000449927 248 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 RPL18AP17-201ENST00000455326 198 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 ST13P14-201ENST00000474095 734 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 RPL7P18-201ENST00000478965 734 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 RPL7P38-201ENST00000488396 739 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC090453.1-201ENST00000495560 436 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 COX7A2P2-201ENST00000505291 250 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MLLT10P2-201ENST00000506434 249 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC034244.1-201ENST00000507687 207 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 RNU5A-4P-201ENST00000516588 111 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MIR2116-201ENST00000517221 80 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC023538.1-201ENST00000534576 736 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 FAM60BP-201ENST00000578364 658 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 MIR4697-201ENST00000582977 78 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 VN1R78P-201ENST00000597393 564 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC010591.1-201ENST00000603941 649 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC006338.2-201ENST00000616864 791 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC015967.1-201ENST00000619893 476 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AL392088.2-201ENST00000637607 285 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 AC004972.1-201ENST00000623934 2209 ntBASIC2.78□□□□□ -1.96
CCDC71LQ8N9Z2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC71LQ8N9Z2 MTND5P24-201ENST00000438892 1767 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC010099.3-201ENST00000423896 409 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC092017.2-201ENST00000427600 362 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 C4BPAP2-201ENST00000428434 478 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 SAR1AP4-201ENST00000429225 591 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 RPS25P9-201ENST00000435591 252 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 MTND2P20-201ENST00000440805 661 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AL590639.1-201ENST00000456484 337 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 snoU109.4-201ENST00000458953 143 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AP001992.1-205ENST00000462248 379 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 RN7SL385P-201ENST00000468873 276 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 APOOP4-201ENST00000513530 597 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 SNORA31.1-201ENST00000515993 133 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 RNU6-1095P-201ENST00000516148 108 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 SNORA31.5-201ENST00000516190 133 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 Y_RNA.717-201ENST00000517106 92 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 MRPS36P3-201ENST00000519284 130 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 OR5AK1P-201ENST00000524837 922 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71LQ8N9Z2 AC009712.1-201ENST00000564938 316 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms