Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNA5SP279-201ENST00000365513 117 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 RN7SKP81-201ENST00000365603 331 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.552-201ENST00000384665 112 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-1156P-201ENST00000410365 100 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 RPL21P50-201ENST00000417698 477 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 DYNLT3P2-201ENST00000442517 295 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AL031274.1-201ENST00000450334 232 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC104634.1-201ENST00000452720 462 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC090602.1-201ENST00000469695 252 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC105758.1-201ENST00000506038 399 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 RNU4-60P-201ENST00000517239 135 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 MIR5188-201ENST00000583467 113 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC006115.2-201ENST00000596823 202 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 SMIM12P1-201ENST00000603004 274 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 AC022400.9-201ENST00000623633 273 ntBASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DEPDC4Q8N2C3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AL365440.1-201ENST00000436135 2167 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC144833.1-201ENST00000567953 4089 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AL391684.1-202ENST00000641293 1636 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 MAPK10-328ENST00000641553 4009 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 THAP12P9-201ENST00000503971 2360 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 LINC01963-201ENST00000562038 3148 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RN7SKP115-201ENST00000363177 317 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RNU4-42P-201ENST00000364738 142 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.324-201ENST00000365165 102 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.396-201ENST00000383949 103 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 Y_RNA.447-201ENST00000384184 113 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-790P-201ENST00000384479 105 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RNU4-70P-201ENST00000384579 139 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 MIR188-201ENST00000385034 86 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 MIR301A-201ENST00000385261 86 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 SNORD73A-201ENST00000386062 65 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 SNORA68.2-201ENST00000391263 128 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC245096.1-201ENST00000413104 546 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AL354766.1-201ENST00000423396 542 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC108479.1-201ENST00000431142 427 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC092324.1-201ENST00000468671 324 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RN7SL326P-201ENST00000477493 296 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC069499.1-201ENST00000489433 509 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC107222.1-201ENST00000510899 637 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC040926.1-201ENST00000530195 238 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AP000889.1-201ENST00000530968 660 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC107918.3-201ENST00000533272 382 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC084121.1-201ENST00000533882 835 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC068446.3-201ENST00000555285 382 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 OR1E3-201ENST00000575608 948 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 MIR1273C-201ENST00000578669 77 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AL512329.2-201ENST00000607350 548 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 AL096712.1-201ENST00000614561 159 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 uc_338.31-201ENST00000615595 186 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.56□□□□□ -1.52
DEPDC4Q8N2C3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms