Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MIR7844-201ENST00000616161 122 ntBASIC4.64□□□□□ -1.67
KRT28Q7Z3Y7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT28Q7Z3Y7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRT28Q7Z3Y7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.64□□□□□ -1.67
KRT28Q7Z3Y7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRT28Q7Z3Y7 OR4G11P-202ENST00000642116 1414 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 NMD3P1-201ENST00000439704 1488 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 CR383658.2-201ENST00000547576 1525 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RNA5SP52-201ENST00000362448 134 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RNU5F-7P-201ENST00000363696 115 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 ARF4P3-201ENST00000397387 509 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RNA5SP306-201ENST00000411087 107 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 Y_RNA.695-201ENST00000516715 107 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC092851.1-201ENST00000535964 478 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 HSPE1P3-201ENST00000559254 309 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 LARP7P2-201ENST00000575306 125 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC006557.5-201ENST00000603126 811 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 AC092354.1-201ENST00000606057 376 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RN7SKP299-201ENST00000606679 301 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 DDX43P2-201ENST00000604753 1354 ntBASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRT28Q7Z3Y7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC011978.2-201ENST00000569835 2054 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL672167.1-206ENST00000356293 943 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RNA5SP197-201ENST00000363357 119 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RNA5SP42-201ENST00000364278 115 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 HSPD1P16-201ENST00000402302 394 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL024474.1-201ENST00000404655 591 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 HMGB1P11-201ENST00000413899 637 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RPL7P30-201ENST00000420888 709 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL049610.1-201ENST00000423374 372 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC010153.1-201ENST00000432862 727 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 ATP5HP2-201ENST00000433885 485 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RPL23AP74-201ENST00000437246 471 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 SNRPEP7-201ENST00000438350 220 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC104073.1-201ENST00000451988 151 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC026410.2-201ENST00000460281 156 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RPL30P9-201ENST00000465586 330 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 TMEM251P1-201ENST00000503717 318 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 SNORD116-26-201ENST00000516006 96 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 RPL12P22-201ENST00000519073 490 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC087276.1-201ENST00000529659 480 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 OR4A45P-201ENST00000529954 901 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC022080.3-201ENST00000544433 482 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC092470.1-201ENST00000546187 132 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC024909.2-201ENST00000553035 286 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC068446.3-201ENST00000555285 382 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 MIR4672-201ENST00000583126 81 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AP001981.2-201ENST00000603241 418 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC007566.2-201ENST00000603642 413 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AL031775.1-201ENST00000607014 887 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC107214.2-201ENST00000608204 634 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC107294.1-201ENST00000609524 467 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC000123.2-201ENST00000623124 461 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 SAGE4P-201ENST00000442271 3381 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 AC130650.2-201ENST00000618736 2403 ntBASIC4.62□□□□□ -1.67
KRT28Q7Z3Y7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AL031985.3-201ENST00000565390 2449 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AL117351.1-201ENST00000438864 766 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 RPS29P31-201ENST00000446147 164 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AL162388.1-201ENST00000450912 352 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 ANP32BP2-201ENST00000454525 545 ntBASIC4.61□□□□□ -1.67
KRT28Q7Z3Y7 AC084357.1-201ENST00000473404 255 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms