Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC104850.1-201ENST00000435940 476 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 MTCYBP6-201ENST00000441810 138 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 RN7SL98P-201ENST00000462271 300 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RPL7P19-201ENST00000469948 618 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC087385.1-201ENST00000475062 312 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RPL7P38-201ENST00000488396 739 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC091167.1-201ENST00000492017 396 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AL358832.1-201ENST00000497800 389 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNF138P1-201ENST00000502765 546 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC105252.1-201ENST00000503089 286 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC026726.1-201ENST00000512859 601 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC022483.1-201ENST00000514020 567 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 SNORA31.9-201ENST00000516429 84 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC008802.1-201ENST00000519121 791 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 MRPL49P2-201ENST00000521066 465 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC022690.1-201ENST00000526681 550 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 YWHAQP7-201ENST00000603536 658 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 BNIP3P11-201ENST00000603878 563 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC115621.1-201ENST00000604653 858 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC112487.2-201ENST00000637950 304 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 CR383658.2-201ENST00000547576 1525 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.68□□□□□ -1.82
USP43Q70EL4 SAGE2P-201ENST00000420011 2126 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
USP43Q70EL4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
USP43Q70EL4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 RNY4P14-201ENST00000363656 96 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 RNA5SP366-201ENST00000365454 123 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP43Q70EL4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
USP43Q70EL4 SNRPFP1-201ENST00000414761 252 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC114814.2-201ENST00000419195 485 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AL512649.1-201ENST00000428997 581 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.68□□□□□ -1.82
USP43Q70EL4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.68□□□□□ -1.82
USP43Q70EL4 RPL7P36-201ENST00000444633 681 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AL359073.1-201ENST00000448036 403 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 HMGN2P7-201ENST00000456186 273 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 OR6K1P-201ENST00000456766 971 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 UQCRHP4-201ENST00000471686 272 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC104687.1-201ENST00000485829 412 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 RPS4XP15-201ENST00000489210 795 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
USP43Q70EL4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.68□□□□□ -1.82
USP43Q70EL4 AP003730.1-201ENST00000524605 285 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.68□□□□□ -1.82
USP43Q70EL4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.68□□□□□ -1.82
USP43Q70EL4 AP001429.1-201ENST00000602568 530 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 ARF4P1-201ENST00000605447 541 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.68□□□□□ -1.82
USP43Q70EL4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 AL161637.1-201ENST00000622380 412 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 MIR492-201ENST00000638676 116 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.68□□□□□ -1.82
USP43Q70EL4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.68□□□□□ -1.82
USP43Q70EL4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP43Q70EL4 AC025125.1-201ENST00000624743 1922 ntBASIC3.68□□□□□ -1.82
USP43Q70EL4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 OR5P1P-201ENST00000299512 925 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USP43Q70EL4 RPL21P132-201ENST00000331267 462 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms