Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC092325.1-201ENST00000566449 554 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC008966.2-201ENST00000606157 453 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AL121992.2-201ENST00000606262 256 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC012603.1-201ENST00000606424 528 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC008536.2-201ENST00000607284 349 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM88Q6PEY1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU1-15P-201ENST00000353977 144 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 Y_RNA.9-201ENST00000362354 101 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU6-223P-201ENST00000362830 107 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 U8.4-201ENST00000363626 134 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU6-188P-201ENST00000364207 107 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 SNORA7.2-201ENST00000364446 145 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 Y_RNA.256-201ENST00000364594 104 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 SNORA70.10-201ENST00000384515 134 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 MIR600-201ENST00000385007 98 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNA5SP345-201ENST00000410646 108 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AMD1P2-201ENST00000412936 992 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RPL23AP27-201ENST00000415161 451 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 MTATP6P30-201ENST00000443540 664 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC016696.1-201ENST00000446949 318 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RPS7P7-201ENST00000463499 571 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RN7SL610P-201ENST00000463845 291 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC007537.2-201ENST00000472093 511 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC083982.1-201ENST00000485679 344 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 VN1R105P-201ENST00000486595 910 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RPL32P9-201ENST00000487963 407 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC104164.2-201ENST00000496953 495 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RPL23AP55-201ENST00000498163 452 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC026427.2-201ENST00000506228 536 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU2-10P-201ENST00000516375 211 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 SNORA31.22-201ENST00000517204 135 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNA5SP373-201ENST00000517271 95 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 RNU6-840P-201ENST00000517275 65 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC012400.1-201ENST00000518452 381 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 OR5AQ1P-201ENST00000527596 927 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC105233.3-201ENST00000531125 744 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 SNRPGP16-201ENST00000533275 226 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 CBX3P5-201ENST00000552017 521 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 HMGB1P33-201ENST00000563485 527 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AL606834.2-201ENST00000602954 668 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AP001330.4-201ENST00000604350 154 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 AC092747.4-201ENST00000620519 1861 ntBASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88Q6PEY1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 AC116096.1-201ENST00000566804 2314 ntBASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 AC138915.3-201ENST00000562908 1389 ntBASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 Y_RNA.22-201ENST00000362492 102 ntBASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 RN7SKP113-201ENST00000363891 295 ntBASIC3.69□□□□□ -1.82
TMEM88Q6PEY1 RNU6-108P-201ENST00000365558 107 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms