Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-444P-201ENST00000383988 108 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-505P-201ENST00000384427 107 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 MIR1-2-201ENST00000384961 85 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 DHFRP6-201ENST00000401776 268 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.615-201ENST00000410769 117 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNU4-14P-201ENST00000410858 122 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 PMCHL1-202ENST00000423102 261 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC007283.2-201ENST00000424739 197 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 USP9YP16-201ENST00000430287 407 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RPL34P6-201ENST00000432390 345 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 FAM103A2P-201ENST00000444122 354 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 USP9YP23-201ENST00000455085 407 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RPL7P22-201ENST00000466005 733 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RPS15AP17-201ENST00000470598 390 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC078785.3-201ENST00000476607 425 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 HMGB3P15-201ENST00000507326 574 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 NPM1P41-201ENST00000512920 831 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-1137P-201ENST00000517073 99 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC090572.1-201ENST00000519251 160 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC022616.3-201ENST00000523940 148 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC026470.2-201ENST00000561492 181 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 MIR3149-201ENST00000584629 83 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC022106.2-201ENST00000620114 757 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC091925.1-201ENST00000623204 462 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC091953.2-201ENST00000623979 160 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC034229.5-201ENST00000624258 185 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNA5SP196-201ENST00000625967 102 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CNKSR3Q6P9H4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.96□□□□□ -1.61
CNKSR3Q6P9H4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-1297P-201ENST00000384415 104 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-308P-201ENST00000390957 107 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AL451054.2-201ENST00000420896 202 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AL354766.1-201ENST00000423396 542 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 OR4C10P-201ENST00000434991 931 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC105402.2-201ENST00000438503 358 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 RNU7-63P-201ENST00000459054 62 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 PARP4P3-201ENST00000510265 317 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 SNORA25.17-201ENST00000517184 124 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC004817.2-201ENST00000561794 651 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 DPPA3P3-201ENST00000603842 430 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 MIR492-201ENST00000638676 116 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 AC107081.3-201ENST00000612715 2034 ntBASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNKSR3Q6P9H4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC090971.4-201ENST00000560291 1800 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 MTND5P33-201ENST00000571250 1450 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC073343.1-201ENST00000328239 651 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 RNU4-44P-201ENST00000363050 141 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms