Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC007619.2-201ENST00000605743 379 ntBASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 MIR3976-201ENST00000606807 139 ntBASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 U2.14-201ENST00000615943 113 ntBASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 MIR6130-201ENST00000619419 109 ntBASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCRAQ6ISU1 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 Y_RNA.581-201ENST00000391017 97 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 VTI1BP4-201ENST00000427516 527 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AL159987.2-201ENST00000432754 307 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AL596266.1-201ENST00000448132 400 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC112187.1-201ENST00000455837 479 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC109925.1-201ENST00000478069 331 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 MRPL42P6-201ENST00000486397 371 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 VN1R105P-201ENST00000486595 910 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC016065.2-201ENST00000514530 444 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 TRAV32-201ENST00000553993 340 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC018552.1-201ENST00000562099 811 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RN7SL52P-201ENST00000584271 284 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC090607.5-201ENST00000615692 224 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RN7SL722P-201ENST00000617780 284 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RN7SL565P-201ENST00000618246 284 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 AC022905.1-201ENST00000503430 3048 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.92□□□□□ -1.46
PTCRAQ6ISU1 RLIMP1-201ENST00000339626 1680 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 Y_RNA.16-201ENST00000362421 102 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RNU1-43P-201ENST00000365052 165 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 SNORA67-201ENST00000384423 137 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RNU6-14P-201ENST00000384630 106 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RNU6-607P-201ENST00000411283 108 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 ISCUP1-201ENST00000454451 448 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 ACA64.4-201ENST00000459070 127 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RNU6-1037P-201ENST00000459571 107 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 HMGN2P13-201ENST00000476476 274 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RPL30P10-201ENST00000488148 337 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AL442163.3-201ENST00000554110 156 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC136932.1-201ENST00000574771 208 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 MIR4675-201ENST00000577898 77 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 LRRC37A5P-203ENST00000580181 585 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AL034351.1-201ENST00000605288 668 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCRAQ6ISU1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTCRAQ6ISU1 ZNF285B-201ENST00000561698 1767 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms