Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 MIR23A-201ENST00000385245 73 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 DEFB108C-201ENST00000400154 252 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC105402.2-201ENST00000438503 358 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 USP9YP29-201ENST00000445112 563 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 COX6CP12-201ENST00000446748 202 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 EEF1E1P1-201ENST00000446998 430 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 TRGVB-201ENST00000453257 471 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC116337.2-201ENST00000477662 156 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 CBX3P3-201ENST00000508108 532 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC023141.12-201ENST00000512399 199 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 DEFB131D-201ENST00000526803 184 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 PTP4A1P6-201ENST00000531034 478 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 CYCSP2-201ENST00000558168 301 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC141257.3-201ENST00000572906 215 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 MIR5186-201ENST00000577504 120 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC005332.10-201ENST00000612725 619 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AC010678.1-201ENST00000614118 713 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AL355365.1-201ENST00000616480 294 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 AL645937.1-201ENST00000641739 1652 ntBASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TTC39AQ5SRH9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC107081.3-201ENST00000612715 2034 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL049781.1-201ENST00000623195 3585 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 RNA5SP391-201ENST00000363456 119 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MIR506-201ENST00000384998 124 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 DSTNP4-201ENST00000399472 474 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 RPS7P15-201ENST00000415804 584 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL953862.1-201ENST00000423016 168 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC092427.1-201ENST00000439177 601 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL512286.1-201ENST00000439244 400 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 snoU13.22-201ENST00000459428 104 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC092757.1-201ENST00000467293 467 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC146507.1-201ENST00000468335 354 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 RPS3AP50-201ENST00000487064 803 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC078817.1-201ENST00000492623 435 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC079140.3-201ENST00000511111 550 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC087276.1-201ENST00000529659 480 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC006270.2-201ENST00000578523 652 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC080078.2-201ENST00000603766 501 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC009509.4-201ENST00000619202 509 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MIR7975-201ENST00000619350 68 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AC018816.2-201ENST00000621460 353 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 AL353746.1-201ENST00000566293 6881 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MTND4P16-201ENST00000466108 1367 ntBASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.24□□□□□ -1.73
TTC39AQ5SRH9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 MFSD8-233ENST00000641482 4860 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 SNORD46.1-201ENST00000364139 104 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 RNU6-723P-201ENST00000383973 107 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 RNU6-921P-201ENST00000384361 107 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 RNY3P10-201ENST00000384764 102 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 USP9YP14-201ENST00000430663 563 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 RPS24P1-201ENST00000438550 371 ntBASIC4.23□□□□□ -1.73
TTC39AQ5SRH9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms