Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.8□□□□□ -1.64
YBX1P67809 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
YBX1P67809 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.8□□□□□ -1.64
YBX1P67809 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 BNIP3P25-201ENST00000596023 559 ntBASIC4.8□□□□□ -1.64
YBX1P67809 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.8□□□□□ -1.64
YBX1P67809 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.8□□□□□ -1.64
YBX1P67809 AL512782.1-201ENST00000603093 364 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC245517.5-201ENST00000611529 162 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
YBX1P67809 SAMMSON-213ENST00000641336 1521 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC090337.1-201ENST00000579651 2074 ntBASIC4.8□□□□□ -1.64
YBX1P67809 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
YBX1P67809 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 Y_RNA.47-201ENST00000362697 108 ntBASIC4.79□□□□□ -1.64
YBX1P67809 Y_RNA.158-201ENST00000363651 101 ntBASIC4.79□□□□□ -1.64
YBX1P67809 RNU6-702P-201ENST00000364982 107 ntBASIC4.79□□□□□ -1.64
YBX1P67809 MT-TG-201ENST00000387429 68 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL078599.1-201ENST00000402075 293 ntBASIC4.79□□□□□ -1.64
YBX1P67809 BX323014.1-201ENST00000412876 237 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.79□□□□□ -1.64
YBX1P67809 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL139396.1-201ENST00000421137 167 ntBASIC4.79□□□□□ -1.64
YBX1P67809 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
YBX1P67809 OR2AM1P-201ENST00000422137 422 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 AL359265.2-201ENST00000434367 631 ntBASIC4.79□□□□□ -1.64
YBX1P67809 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.79□□□□□ -1.64
YBX1P67809 FTH1P1-201ENST00000437933 532 ntBASIC4.79□□□□□ -1.64
YBX1P67809 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 RPS26P56-201ENST00000444468 240 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL035666.1-201ENST00000446195 348 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC104058.1-201ENST00000448028 297 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 TPT1P13-201ENST00000449760 499 ntBASIC4.79□□□□□ -1.64
YBX1P67809 MTND1P9-201ENST00000453775 944 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC104308.1-201ENST00000454621 333 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 AC006511.1-201ENST00000470614 315 ntBASIC4.79□□□□□ -1.64
YBX1P67809 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 RN7SL319P-201ENST00000480656 221 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC090686.1-201ENST00000481577 749 ntBASIC4.79□□□□□ -1.64
YBX1P67809 IGLV2-34-201ENST00000490007 283 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC005726.1-201ENST00000494679 427 ntBASIC4.79□□□□□ -1.64
YBX1P67809 RPS27P27-201ENST00000498779 255 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC020893.1-201ENST00000502452 580 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
YBX1P67809 FTH1P21-201ENST00000512179 511 ntBASIC4.79□□□□□ -1.64
YBX1P67809 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 RNU6-1271P-201ENST00000517049 105 ntBASIC4.79□□□□□ -1.64
YBX1P67809 RNA5SP454-201ENST00000517231 127 ntBASIC4.79□□□□□ -1.64
YBX1P67809 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.79□□□□□ -1.64
YBX1P67809 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 AL161670.1-201ENST00000554348 137 ntBASIC4.79□□□□□ -1.64
YBX1P67809 MIR4504-201ENST00000577413 92 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.79□□□□□ -1.64
YBX1P67809 AF038458.1-201ENST00000588406 262 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.79□□□□□ -1.64
YBX1P67809 AC103710.2-201ENST00000609912 942 ntBASIC4.79□□□□□ -1.64
YBX1P67809 EIF3FP1-201ENST00000613970 806 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL157817.1-201ENST00000614264 790 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AC133104.2-201ENST00000615272 193 ntBASIC4.79□□□□□ -1.64
YBX1P67809 AL049794.2-201ENST00000616301 365 ntBASIC4.79□□□□□ -1.64
YBX1P67809 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 AC009902.3-201ENST00000606235 2172 ntBASIC4.79□□□□□ -1.64
YBX1P67809 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YBX1P67809 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.79□□□□□ -1.64
YBX1P67809 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
YBX1P67809 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.78□□□□□ -1.64
YBX1P67809 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
YBX1P67809 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
YBX1P67809 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 AL139276.1-201ENST00000311910 1001 ntBASIC4.78□□□□□ -1.64
YBX1P67809 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
YBX1P67809 RNA5SP258-201ENST00000362750 119 ntBASIC4.78□□□□□ -1.64
YBX1P67809 SNORD113-7-201ENST00000363762 77 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms