Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RN7SKP96-201ENST00000516948 297 ntBASIC1.91□□□□□ -2.1
LSM3P62310 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.91□□□□□ -2.1
LSM3P62310 HIGD1AP5-201ENST00000529959 259 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AP000867.2-201ENST00000532468 320 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AL049870.4-201ENST00000555741 486 ntBASIC1.91□□□□□ -2.1
LSM3P62310 ANP32BP3-201ENST00000559213 706 ntBASIC1.91□□□□□ -2.1
LSM3P62310 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM3P62310 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM3P62310 AC053481.3-201ENST00000577881 843 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM3P62310 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
LSM3P62310 MIR4658-201ENST00000584344 65 ntBASIC1.91□□□□□ -2.1
LSM3P62310 VN1R78P-201ENST00000597393 564 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AC135803.1-201ENST00000608748 565 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AL355810.1-201ENST00000614629 552 ntBASIC1.91□□□□□ -2.1
LSM3P62310 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.91□□□□□ -2.1
LSM3P62310 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
LSM3P62310 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
LSM3P62310 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
LSM3P62310 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.91□□□□□ -2.1
LSM3P62310 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
LSM3P62310 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM3P62310 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.9□□□□□ -2.1
LSM3P62310 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.11
LSM3P62310 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.11
LSM3P62310 DSTNP4-201ENST00000399472 474 ntBASIC1.9□□□□□ -2.11
LSM3P62310 RPS3AP25-201ENST00000411660 793 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 AL356320.2-201ENST00000417263 507 ntBASIC1.9□□□□□ -2.11
LSM3P62310 KRR1P1-201ENST00000419430 803 ntBASIC1.9□□□□□ -2.11
LSM3P62310 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 AL513175.1-201ENST00000431492 780 ntBASIC1.9□□□□□ -2.11
LSM3P62310 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 ARL5AP3-201ENST00000439327 386 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.9□□□□□ -2.11
LSM3P62310 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM3P62310 AL359385.1-201ENST00000456509 365 ntBASIC1.9□□□□□ -2.11
LSM3P62310 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC096751.1-202ENST00000502691 1067 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC234781.5-201ENST00000508429 271 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM3P62310 MTCO1P47-201ENST00000523889 1271 ntBASIC1.9□□□□□ -2.11
LSM3P62310 SNRPGP16-201ENST00000533275 226 ntBASIC1.9□□□□□ -2.11
LSM3P62310 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM3P62310 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM3P62310 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.9□□□□□ -2.11
LSM3P62310 EIF5A2P1-201ENST00000564027 460 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC007621.1-201ENST00000604544 437 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC245389.1-201ENST00000605141 529 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.9□□□□□ -2.11
LSM3P62310 AC245517.5-201ENST00000611529 162 ntBASIC1.9□□□□□ -2.11
LSM3P62310 AL360181.4-201ENST00000621752 134 ntBASIC1.9□□□□□ -2.11
LSM3P62310 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.11
LSM3P62310 MTND5P28-201ENST00000438005 1594 ntBASIC1.89□□□□□ -2.11
LSM3P62310 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LSM3P62310 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.89□□□□□ -2.11
LSM3P62310 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
LSM3P62310 RNU2-25P-201ENST00000411041 191 ntBASIC1.89□□□□□ -2.11
LSM3P62310 RAB28P1-201ENST00000411517 641 ntBASIC1.89□□□□□ -2.11
LSM3P62310 OFD1P18Y-201ENST00000420889 959 ntBASIC1.89□□□□□ -2.11
LSM3P62310 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM3P62310 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM3P62310 PGBD4P3-201ENST00000440731 581 ntBASIC1.89□□□□□ -2.11
LSM3P62310 AL513321.1-201ENST00000441175 761 ntBASIC1.89□□□□□ -2.11
LSM3P62310 USP9YP8-201ENST00000441913 500 ntBASIC1.89□□□□□ -2.11
LSM3P62310 CDC27P1-201ENST00000445384 715 ntBASIC1.89□□□□□ -2.11
LSM3P62310 NANOGNBP1-201ENST00000448444 480 ntBASIC1.89□□□□□ -2.11
LSM3P62310 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.89□□□□□ -2.11
LSM3P62310 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.89□□□□□ -2.11
LSM3P62310 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM3P62310 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LSM3P62310 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.89□□□□□ -2.11
LSM3P62310 RNA5SP471-201ENST00000516971 106 ntBASIC1.89□□□□□ -2.11
LSM3P62310 UBTFL10-201ENST00000528532 562 ntBASIC1.89□□□□□ -2.11
LSM3P62310 MIR3158-1-201ENST00000583596 81 ntBASIC1.89□□□□□ -2.11
LSM3P62310 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.89□□□□□ -2.11
LSM3P62310 AL161756.2-201ENST00000604597 246 ntBASIC1.89□□□□□ -2.11
LSM3P62310 AP004372.1-201ENST00000604842 844 ntBASIC1.89□□□□□ -2.11
LSM3P62310 AC092650.2-201ENST00000619984 902 ntBASIC1.89□□□□□ -2.11
LSM3P62310 MIR8057-201ENST00000620957 69 ntBASIC1.89□□□□□ -2.11
LSM3P62310 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.89□□□□□ -2.11
LSM3P62310 AC079597.1-201ENST00000624306 508 ntBASIC1.89□□□□□ -2.11
LSM3P62310 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LSM3P62310 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
LSM3P62310 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM3P62310 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LSM3P62310 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LSM3P62310 AC135776.4-201ENST00000624300 1904 ntBASIC1.88□□□□□ -2.11
LSM3P62310 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.88□□□□□ -2.11
LSM3P62310 RNU6-1249P-201ENST00000363237 111 ntBASIC1.88□□□□□ -2.11
LSM3P62310 MIR493-201ENST00000385254 89 ntBASIC1.88□□□□□ -2.11
LSM3P62310 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC096533.1-201ENST00000411645 353 ntBASIC1.88□□□□□ -2.11
LSM3P62310 MTCO3P12-201ENST00000416718 547 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms