Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MTCO1P30-201ENST00000515244 580 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RNU6-1261P-201ENST00000517194 104 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC239860.2-201ENST00000525886 270 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AP002748.2-201ENST00000528671 348 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 DEFB108A-201ENST00000530110 222 ntBASIC3.13□□□□□ -1.91
LMO4P61968 ZNF705CP-201ENST00000530515 889 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO4P61968 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.13□□□□□ -1.91
LMO4P61968 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 AC012603.1-201ENST00000606424 528 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC004067.1-201ENST00000608733 700 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AL159169.3-201ENST00000608871 561 ntBASIC3.13□□□□□ -1.91
LMO4P61968 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC120349.2-201ENST00000625002 298 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AL157786.1-207ENST00000627771 695 ntBASIC3.13□□□□□ -1.91
LMO4P61968 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 OR5BR1P-201ENST00000524992 1330 ntBASIC3.13□□□□□ -1.91
LMO4P61968 OR11H5P-202ENST00000641612 1325 ntBASIC3.13□□□□□ -1.91
LMO4P61968 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 ZNF37BP-203ENST00000452306 1352 ntBASIC3.12□□□□□ -1.91
LMO4P61968 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LMO4P61968 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 LINC00561-201ENST00000565815 2738 ntBASIC3.12□□□□□ -1.91
LMO4P61968 SNORA63.1-201ENST00000362493 131 ntBASIC3.12□□□□□ -1.91
LMO4P61968 RNVU1-3-201ENST00000364313 161 ntBASIC3.12□□□□□ -1.91
LMO4P61968 RNA5SP51-201ENST00000364750 119 ntBASIC3.12□□□□□ -1.91
LMO4P61968 RNA5SP167-201ENST00000365461 116 ntBASIC3.12□□□□□ -1.91
LMO4P61968 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 MT-TC-201ENST00000387405 66 ntBASIC3.12□□□□□ -1.91
LMO4P61968 SOD2P1-201ENST00000396543 562 ntBASIC3.12□□□□□ -1.91
LMO4P61968 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.12□□□□□ -1.91
LMO4P61968 AL450338.1-201ENST00000407987 512 ntBASIC3.12□□□□□ -1.91
LMO4P61968 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 RNU6-248P-201ENST00000410720 107 ntBASIC3.12□□□□□ -1.91
LMO4P61968 HMGN1P14-201ENST00000412459 517 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC092634.6-201ENST00000418558 192 ntBASIC3.12□□□□□ -1.91
LMO4P61968 OFD1P18Y-201ENST00000420889 959 ntBASIC3.12□□□□□ -1.91
LMO4P61968 MTCO3P1-205ENST00000422088 832 ntBASIC3.12□□□□□ -1.91
LMO4P61968 RPS12P5-201ENST00000423449 371 ntBASIC3.12□□□□□ -1.91
LMO4P61968 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.12□□□□□ -1.91
LMO4P61968 HMGN2P31-201ENST00000432430 273 ntBASIC3.12□□□□□ -1.91
LMO4P61968 MTND3P21-201ENST00000433774 331 ntBASIC3.12□□□□□ -1.91
LMO4P61968 SNORA71B-202ENST00000439232 272 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AL831737.1-201ENST00000441288 271 ntBASIC3.12□□□□□ -1.91
LMO4P61968 RPL23AP16-201ENST00000441715 421 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC073587.1-201ENST00000447093 876 ntBASIC3.12□□□□□ -1.91
LMO4P61968 PAXBP1P1-201ENST00000449315 447 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC098824.1-201ENST00000453565 980 ntBASIC3.12□□□□□ -1.91
LMO4P61968 MTCO3P2-201ENST00000457365 171 ntBASIC3.12□□□□□ -1.91
LMO4P61968 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.12□□□□□ -1.91
LMO4P61968 OR4G11P-201ENST00000492842 939 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC023424.2-201ENST00000493479 777 ntBASIC3.12□□□□□ -1.91
LMO4P61968 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.12□□□□□ -1.91
LMO4P61968 SNORA48.10-201ENST00000516965 160 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.12□□□□□ -1.91
LMO4P61968 IGKV2D-19-201ENST00000523346 262 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.12□□□□□ -1.91
LMO4P61968 AC118273.2-201ENST00000532092 465 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.12□□□□□ -1.91
LMO4P61968 AC136618.2-201ENST00000575091 400 ntBASIC3.12□□□□□ -1.91
LMO4P61968 SNORA59B-202ENST00000578183 701 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.12□□□□□ -1.91
LMO4P61968 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 SNORD39.3-201ENST00000584451 71 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 AC025588.3-201ENST00000604182 274 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AL022154.1-201ENST00000604698 785 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC128687.2-201ENST00000609657 566 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC017083.3-201ENST00000609955 700 ntBASIC3.12□□□□□ -1.91
LMO4P61968 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC019176.2-201ENST00000611579 315 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC007014.2-201ENST00000615581 479 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AL391261.4-201ENST00000616012 481 ntBASIC3.12□□□□□ -1.91
LMO4P61968 AC079684.1-201ENST00000621405 437 ntBASIC3.12□□□□□ -1.91
LMO4P61968 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.12□□□□□ -1.91
LMO4P61968 AC026634.1-201ENST00000634369 198 ntBASIC3.12□□□□□ -1.91
LMO4P61968 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.12□□□□□ -1.91
LMO4P61968 LINC01355-201ENST00000566551 5444 ntBASIC3.12□□□□□ -1.91
LMO4P61968 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms