Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
GFRA1P56159 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
GFRA1P56159 MIR548F5-201ENST00000408421 86 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC074085.1-201ENST00000413598 418 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 RPL7P10-201ENST00000417407 739 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 HMGN2P27-201ENST00000427352 270 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 BRK1P2-201ENST00000442875 223 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC104058.1-201ENST00000448028 297 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 VN1R17P-201ENST00000472048 1090 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 AC098976.1-201ENST00000513014 541 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 BTF3P13-201ENST00000513224 490 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 AP006587.4-201ENST00000526053 529 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AP000676.2-201ENST00000529711 301 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 BNIP3P5-201ENST00000562290 498 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA1P56159 MIR4691-201ENST00000583764 85 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC245389.1-201ENST00000605141 529 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 RNA5SP108-201ENST00000605921 117 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC009570.1-201ENST00000609599 745 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 U2.17-201ENST00000611454 95 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 AC103705.1-201ENST00000619013 241 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 MIR6715B-201ENST00000637172 77 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.61□□□□□ -1.67
GFRA1P56159 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.61□□□□□ -1.67
GFRA1P56159 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 SOCS5P3-201ENST00000425115 1576 ntBASIC4.61□□□□□ -1.67
GFRA1P56159 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.61□□□□□ -1.67
GFRA1P56159 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.61□□□□□ -1.67
GFRA1P56159 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GFRA1P56159 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 RNA5SP219-201ENST00000390940 113 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AL645733.1-201ENST00000402250 217 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 RN7SKP125-201ENST00000410481 302 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
GFRA1P56159 VN1R36P-201ENST00000414936 291 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC119751.6-201ENST00000416712 186 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 AL451139.1-201ENST00000434718 346 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 RHOT1P3-201ENST00000436571 331 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 GTF2IP13-201ENST00000438487 386 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 RPL34P20-201ENST00000442771 351 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC012181.1-201ENST00000479895 423 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC231760.1-201ENST00000498002 260 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 COX6B1P5-201ENST00000509843 249 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.6□□□□□ -1.67
GFRA1P56159 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 RNU6-256P-201ENST00000516747 97 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 RNU6-566P-201ENST00000516790 107 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 RNU6-1088P-201ENST00000516850 104 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC027369.5-201ENST00000533838 755 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.6□□□□□ -1.67
GFRA1P56159 MIR4790-201ENST00000577799 79 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC067852.3-201ENST00000589177 561 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms