Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.45□□□□□ -1.86
VCPP55072 VN1R104P-201ENST00000505115 1009 ntBASIC3.45□□□□□ -1.86
VCPP55072 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.45□□□□□ -1.86
VCPP55072 SNORA64.4-201ENST00000516632 81 ntBASIC3.45□□□□□ -1.86
VCPP55072 SCARNA20.6-201ENST00000517251 106 ntBASIC3.45□□□□□ -1.86
VCPP55072 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.45□□□□□ -1.86
VCPP55072 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.45□□□□□ -1.86
VCPP55072 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.45□□□□□ -1.86
VCPP55072 AC093519.1-201ENST00000566109 298 ntBASIC3.45□□□□□ -1.86
VCPP55072 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.45□□□□□ -1.86
VCPP55072 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.45□□□□□ -1.86
VCPP55072 DPRXP5-201ENST00000604662 539 ntBASIC3.45□□□□□ -1.86
VCPP55072 AL451074.6-201ENST00000608512 729 ntBASIC3.45□□□□□ -1.86
VCPP55072 AC090116.1-201ENST00000615679 446 ntBASIC3.45□□□□□ -1.86
VCPP55072 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 AC117529.2-201ENST00000512159 2068 ntBASIC3.44□□□□□ -1.86
VCPP55072 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 RNU6-989P-201ENST00000362756 107 ntBASIC3.44□□□□□ -1.86
VCPP55072 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
VCPP55072 MIR649-201ENST00000384843 97 ntBASIC3.44□□□□□ -1.86
VCPP55072 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VCPP55072 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VCPP55072 AL445529.1-201ENST00000398713 389 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC109780.2-201ENST00000413467 845 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 MTCO3P12-201ENST00000416718 547 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 RAC1P8-201ENST00000427086 527 ntBASIC3.44□□□□□ -1.86
VCPP55072 MTCO1P3-201ENST00000429327 192 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 RPL23AP69-201ENST00000431134 458 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
VCPP55072 RPL17P49-201ENST00000443728 411 ntBASIC3.44□□□□□ -1.86
VCPP55072 EXOSC3P1-201ENST00000448649 500 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL034418.1-201ENST00000448675 860 ntBASIC3.44□□□□□ -1.86
VCPP55072 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 OR5H5P-201ENST00000503164 928 ntBASIC3.44□□□□□ -1.86
VCPP55072 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.44□□□□□ -1.86
VCPP55072 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.44□□□□□ -1.86
VCPP55072 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.44□□□□□ -1.86
VCPP55072 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.44□□□□□ -1.86
VCPP55072 MIR4509-3-201ENST00000578671 94 ntBASIC3.44□□□□□ -1.86
VCPP55072 MIR4509-2-201ENST00000583920 94 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC016597.2-201ENST00000613256 341 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC009464.1-201ENST00000615731 469 ntBASIC3.44□□□□□ -1.86
VCPP55072 MIR4509-1-201ENST00000618224 94 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL356321.1-201ENST00000621360 228 ntBASIC3.44□□□□□ -1.86
VCPP55072 AC018692.3-201ENST00000623929 123 ntBASIC3.44□□□□□ -1.86
VCPP55072 AL512506.2-201ENST00000624472 458 ntBASIC3.44□□□□□ -1.86
VCPP55072 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VCPP55072 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
VCPP55072 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VCPP55072 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
VCPP55072 AL354719.1-201ENST00000406535 843 ntBASIC3.43□□□□□ -1.86
VCPP55072 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.43□□□□□ -1.86
VCPP55072 YPEL5P1-201ENST00000419731 367 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC006548.1-201ENST00000427470 102 ntBASIC3.43□□□□□ -1.86
VCPP55072 RPL23AP22-201ENST00000437556 453 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 AC092393.1-201ENST00000439625 742 ntBASIC3.43□□□□□ -1.86
VCPP55072 TRIM60P18-201ENST00000441518 828 ntBASIC3.43□□□□□ -1.86
VCPP55072 HMGB3P6-201ENST00000444896 598 ntBASIC3.43□□□□□ -1.86
VCPP55072 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 AC010301.1-201ENST00000473936 355 ntBASIC3.43□□□□□ -1.86
VCPP55072 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC109925.1-201ENST00000478069 331 ntBASIC3.43□□□□□ -1.86
VCPP55072 VPS26AP1-201ENST00000483197 979 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC113420.1-201ENST00000507903 571 ntBASIC3.43□□□□□ -1.86
VCPP55072 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
VCPP55072 AP000790.1-201ENST00000528891 737 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.43□□□□□ -1.86
VCPP55072 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VCPP55072 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.43□□□□□ -1.86
VCPP55072 AC087481.2-201ENST00000565492 330 ntBASIC3.43□□□□□ -1.86
VCPP55072 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.43□□□□□ -1.86
VCPP55072 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
VCPP55072 SNORD39.3-201ENST00000584451 71 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.43□□□□□ -1.86
VCPP55072 AL133393.1-201ENST00000603277 287 ntBASIC3.43□□□□□ -1.86
VCPP55072 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
VCPP55072 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC010975.3-201ENST00000618727 978 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms