Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC126389.1-201ENST00000477436 290 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 RPL31P13-201ENST00000484151 370 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCS2P54868 USP9YP5-201ENST00000511770 630 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 RNU6-488P-201ENST00000515918 99 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS2P54868 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS2P54868 YWHAQP7-201ENST00000603536 658 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AP003973.1-201ENST00000604639 691 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AL009028.1-201ENST00000604895 802 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AC023158.2-201ENST00000614876 543 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AC107081.3-201ENST00000612715 2034 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 AL359693.1-201ENST00000614959 2407 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS2P54868 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMGCS2P54868 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS2P54868 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS2P54868 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS2P54868 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS2P54868 HMGB1P5-201ENST00000255320 642 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 RNU4-92P-201ENST00000363783 136 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 SNORA51.2-201ENST00000364595 132 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC007435.1-201ENST00000421086 415 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC084290.1-201ENST00000434995 374 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS2P54868 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS2P54868 AC093155.1-201ENST00000440164 826 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 ELOCP13-201ENST00000443934 329 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS2P54868 Z99714.1-201ENST00000450463 807 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 RPL23AP62-201ENST00000463396 453 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 SNRPGP3-201ENST00000469405 227 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AP000893.1-201ENST00000474462 794 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS2P54868 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS2P54868 EEF1A1P37-201ENST00000522748 715 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AP001207.1-201ENST00000524051 481 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS2P54868 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS2P54868 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS2P54868 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS2P54868 AL157394.1-201ENST00000562983 1224 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 MIR4504-201ENST00000577413 92 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGCS2P54868 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS2P54868 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS2P54868 AC008507.1-201ENST00000587506 734 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC107952.2-201ENST00000606048 486 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 HMGN2P28-201ENST00000606102 262 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC092106.3-201ENST00000611308 722 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC024257.5-201ENST00000612739 531 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC079395.3-201ENST00000615161 484 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 AC022509.4-201ENST00000621404 572 ntBASIC3.34□□□□□ -1.87
HMGCS2P54868 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.88
HMGCS2P54868 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGCS2P54868 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGCS2P54868 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HMGCS2P54868 Y_RNA.408-201ENST00000383987 102 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 RNU6-636P-201ENST00000384598 107 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AL360182.1-201ENST00000397433 468 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 MTCO3P31-201ENST00000405526 789 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 RNA5SP107-201ENST00000411358 122 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 FCF1P2-201ENST00000415284 583 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 LUZP4P1-201ENST00000415420 344 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS2P54868 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 RPL36P19-201ENST00000430744 301 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 SEPT7P5-201ENST00000434048 306 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS2P54868 RPL32P28-201ENST00000443577 397 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AC112653.1-201ENST00000443851 386 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 RPS26P56-201ENST00000444468 240 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 Z73417.1-201ENST00000447373 778 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC011979.1-201ENST00000472300 483 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AP001025.2-201ENST00000490908 477 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 AC114781.4-201ENST00000513707 639 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 Y_RNA.717-201ENST00000517106 92 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS2P54868 MRPS36P3-201ENST00000519284 130 ntBASIC3.33□□□□□ -1.88
HMGCS2P54868 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms