Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.8□□□□□ -1.8
HADHAP40939 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.8□□□□□ -1.8
HADHAP40939 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HADHAP40939 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.8□□□□□ -1.8
HADHAP40939 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.8□□□□□ -1.8
HADHAP40939 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.8□□□□□ -1.8
HADHAP40939 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.8□□□□□ -1.8
HADHAP40939 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.8□□□□□ -1.8
HADHAP40939 ELOCP35-201ENST00000604289 336 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AC112187.2-201ENST00000604345 283 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AC012443.1-201ENST00000605605 231 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AC018638.7-201ENST00000605836 1114 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AL392048.1-201ENST00000613946 534 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
HADHAP40939 AL356596.1-201ENST00000624230 379 ntBASIC3.8□□□□□ -1.8
HADHAP40939 MIR4275-201ENST00000636486 87 ntBASIC3.8□□□□□ -1.8
HADHAP40939 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HADHAP40939 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HADHAP40939 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.8□□□□□ -1.8
HADHAP40939 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HADHAP40939 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
HADHAP40939 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.79□□□□□ -1.8
HADHAP40939 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
HADHAP40939 RPL21P32-201ENST00000419877 477 ntBASIC3.79□□□□□ -1.8
HADHAP40939 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 UBE2V1P13-201ENST00000436983 439 ntBASIC3.79□□□□□ -1.8
HADHAP40939 HMGN2P20-201ENST00000437531 273 ntBASIC3.79□□□□□ -1.8
HADHAP40939 RPS29P7-201ENST00000439662 171 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.79□□□□□ -1.8
HADHAP40939 AC010655.1-201ENST00000449336 292 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC234775.1-201ENST00000454247 670 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AL136097.1-201ENST00000456945 913 ntBASIC3.79□□□□□ -1.8
HADHAP40939 RPL7P15-201ENST00000461190 712 ntBASIC3.79□□□□□ -1.8
HADHAP40939 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.79□□□□□ -1.8
HADHAP40939 AC034159.1-201ENST00000513885 583 ntBASIC3.79□□□□□ -1.8
HADHAP40939 SNORA67.7-201ENST00000516664 135 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HADHAP40939 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 HSPE1P5-201ENST00000561489 272 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC145350.1-201ENST00000567426 208 ntBASIC3.79□□□□□ -1.8
HADHAP40939 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 MIR3158-1-201ENST00000583596 81 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AL022099.1-201ENST00000604551 712 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AL390240.1-201ENST00000612950 384 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AC005344.1-201ENST00000613391 459 ntBASIC3.79□□□□□ -1.8
HADHAP40939 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.79□□□□□ -1.8
HADHAP40939 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 AC099063.3-201ENST00000642066 185 ntBASIC3.79□□□□□ -1.8
HADHAP40939 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
HADHAP40939 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HADHAP40939 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
HADHAP40939 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
HADHAP40939 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
HADHAP40939 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 RNU6-433P-201ENST00000363216 104 ntBASIC3.78□□□□□ -1.8
HADHAP40939 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 AL359837.1-201ENST00000381357 287 ntBASIC3.78□□□□□ -1.8
HADHAP40939 MIR135A2-201ENST00000384854 100 ntBASIC3.78□□□□□ -1.8
HADHAP40939 PTMAP2-201ENST00000397627 327 ntBASIC3.78□□□□□ -1.8
HADHAP40939 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.78□□□□□ -1.8
HADHAP40939 TPMTP3-201ENST00000411928 735 ntBASIC3.78□□□□□ -1.8
HADHAP40939 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.78□□□□□ -1.8
HADHAP40939 MTCYBP39-201ENST00000437562 491 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC092754.2-201ENST00000463506 460 ntBASIC3.78□□□□□ -1.8
HADHAP40939 RPS27AP1-201ENST00000475545 471 ntBASIC3.78□□□□□ -1.8
HADHAP40939 RPS3AP22-201ENST00000488297 769 ntBASIC3.78□□□□□ -1.8
HADHAP40939 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 RAC1P2-201ENST00000511164 579 ntBASIC3.78□□□□□ -1.8
HADHAP40939 RN7SKP13-201ENST00000515933 244 ntBASIC3.78□□□□□ -1.8
HADHAP40939 RNA5SP208-201ENST00000516156 78 ntBASIC3.78□□□□□ -1.8
HADHAP40939 RNU1-45P-201ENST00000517191 141 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 AC008489.1-201ENST00000524271 483 ntBASIC3.78□□□□□ -1.8
HADHAP40939 DUXAP5-201ENST00000529668 529 ntBASIC3.78□□□□□ -1.8
HADHAP40939 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms