Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SNORA4.1-201ENST00000364263 144 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 SNORA51.2-201ENST00000364595 132 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 SNORD51-201ENST00000384320 80 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 RPS24P12-201ENST00000402084 394 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 MTND1P32-201ENST00000433043 938 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.04□□□□□ -1.76
TM4SF1P30408 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AC008264.1-201ENST00000447612 367 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 RPL23AP35-201ENST00000451906 501 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM4SF1P30408 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.04□□□□□ -1.76
TM4SF1P30408 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AC090543.2-201ENST00000483963 348 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AC118282.1-201ENST00000506408 765 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 AC006499.2-201ENST00000513470 337 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 RNU2-58P-201ENST00000516403 183 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AL121576.1-201ENST00000556055 276 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 CYCSP2-201ENST00000558168 301 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.04□□□□□ -1.76
TM4SF1P30408 MIR3945-201ENST00000581853 98 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.04□□□□□ -1.76
TM4SF1P30408 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.04□□□□□ -1.76
TM4SF1P30408 OR2AS2P-201ENST00000606902 342 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.04□□□□□ -1.76
TM4SF1P30408 AL513302.2-201ENST00000562313 1842 ntBASIC4.04□□□□□ -1.76
TM4SF1P30408 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 AC004925.1-201ENST00000624256 2706 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 MIR607-201ENST00000385241 96 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 SNORA48.8-201ENST00000391324 134 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AC119751.3-201ENST00000399720 670 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.03□□□□□ -1.76
TM4SF1P30408 MTCYBP38-201ENST00000417160 1123 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AL953862.1-201ENST00000423016 168 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 KC877373.1-201ENST00000479066 408 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 AC104090.1-201ENST00000506341 1171 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.03□□□□□ -1.76
TM4SF1P30408 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 RNA5SP356-201ENST00000515972 94 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 RNU6-150P-201ENST00000516237 95 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 RPL12P22-201ENST00000519073 490 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AP003461.1-201ENST00000528866 78 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
TM4SF1P30408 VN1R78P-201ENST00000597393 564 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AL136981.2-201ENST00000617319 734 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.03□□□□□ -1.76
TM4SF1P30408 AC007490.1-201ENST00000624321 703 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.03□□□□□ -1.76
TM4SF1P30408 MTND5P24-201ENST00000438892 1767 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
TM4SF1P30408 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.03□□□□□ -1.76
TM4SF1P30408 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM4SF1P30408 OR4G11P-202ENST00000642116 1414 ntBASIC4.03□□□□□ -1.76
TM4SF1P30408 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM4SF1P30408 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM4SF1P30408 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM4SF1P30408 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AL138880.1-201ENST00000405824 642 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 RNA5SP229-201ENST00000410809 99 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.02□□□□□ -1.77
TM4SF1P30408 HMGB1P15-201ENST00000453854 435 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.02□□□□□ -1.77
TM4SF1P30408 FCF1P3-201ENST00000496394 590 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 VN1R104P-201ENST00000505115 1009 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 H3F3AP1-201ENST00000559984 334 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.02□□□□□ -1.77
TM4SF1P30408 AC006270.2-201ENST00000578523 652 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 BBIP1P1-201ENST00000602999 279 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.02□□□□□ -1.77
TM4SF1P30408 uc_338.1-201ENST00000612113 180 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 AC009159.2-201ENST00000617603 606 ntBASIC4.02□□□□□ -1.77
TM4SF1P30408 AC018755.4-201ENST00000619715 454 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms