Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005951.2-201ENST00000576282 495 ntBASIC4.33□□□□□ -1.72
CD40P25942 MTCYBP13-201ENST00000578634 1093 ntBASIC4.33□□□□□ -1.72
CD40P25942 MIR4742-201ENST00000581069 85 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 SNRPGP15-201ENST00000600149 222 ntBASIC4.33□□□□□ -1.72
CD40P25942 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 DPPA3P3-201ENST00000603842 430 ntBASIC4.33□□□□□ -1.72
CD40P25942 AL158032.1-201ENST00000605401 106 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC012409.4-201ENST00000612923 249 ntBASIC4.33□□□□□ -1.72
CD40P25942 AC007998.5-201ENST00000622938 237 ntBASIC4.33□□□□□ -1.72
CD40P25942 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40P25942 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CD40P25942 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 MAPK10-263ENST00000641052 4307 ntBASIC4.33□□□□□ -1.72
CD40P25942 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.33□□□□□ -1.72
CD40P25942 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40P25942 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CD40P25942 AC006026.1-201ENST00000444025 1803 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC009812.4-201ENST00000569134 1805 ntBASIC4.32□□□□□ -1.72
CD40P25942 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 AL137003.2-201ENST00000606924 2538 ntBASIC4.32□□□□□ -1.72
CD40P25942 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 RNU6-335P-201ENST00000364563 113 ntBASIC4.32□□□□□ -1.72
CD40P25942 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 RNU6-116P-201ENST00000384042 109 ntBASIC4.32□□□□□ -1.72
CD40P25942 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
CD40P25942 RPL37P18-201ENST00000411602 243 ntBASIC4.32□□□□□ -1.72
CD40P25942 MTCO1P39-201ENST00000426148 480 ntBASIC4.32□□□□□ -1.72
CD40P25942 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.32□□□□□ -1.72
CD40P25942 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 RPL7P19-201ENST00000469948 618 ntBASIC4.32□□□□□ -1.72
CD40P25942 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.32□□□□□ -1.72
CD40P25942 VN1R104P-201ENST00000505115 1009 ntBASIC4.32□□□□□ -1.72
CD40P25942 CCDC34P1-201ENST00000507441 517 ntBASIC4.32□□□□□ -1.72
CD40P25942 MRPS33P2-201ENST00000507850 322 ntBASIC4.32□□□□□ -1.72
CD40P25942 KLHL2P1-201ENST00000508691 521 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 CDH12P4-201ENST00000517835 295 ntBASIC4.32□□□□□ -1.72
CD40P25942 CDH12P3-201ENST00000517935 295 ntBASIC4.32□□□□□ -1.72
CD40P25942 CDH12P1-201ENST00000518435 295 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
CD40P25942 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 AC093027.1-201ENST00000546698 429 ntBASIC4.32□□□□□ -1.72
CD40P25942 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 TVP23CP2-201ENST00000571473 623 ntBASIC4.32□□□□□ -1.72
CD40P25942 FAM60BP-201ENST00000578364 658 ntBASIC4.32□□□□□ -1.72
CD40P25942 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.32□□□□□ -1.72
CD40P25942 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.32□□□□□ -1.72
CD40P25942 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.32□□□□□ -1.72
CD40P25942 AC067852.3-201ENST00000589177 561 ntBASIC4.32□□□□□ -1.72
CD40P25942 AL031320.1-201ENST00000604177 357 ntBASIC4.32□□□□□ -1.72
CD40P25942 AL670379.4-201ENST00000605279 254 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC021646.1-201ENST00000605469 484 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC092807.2-201ENST00000609367 243 ntBASIC4.32□□□□□ -1.72
CD40P25942 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 AL357559.1-201ENST00000622228 274 ntBASIC4.32□□□□□ -1.72
CD40P25942 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CD40P25942 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CD40P25942 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.32□□□□□ -1.72
CD40P25942 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD40P25942 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD40P25942 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.31□□□□□ -1.72
CD40P25942 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD40P25942 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD40P25942 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 AC099654.2-201ENST00000433031 1980 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC004817.4-201ENST00000602396 3625 ntBASIC4.31□□□□□ -1.72
CD40P25942 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 AP001029.2-203ENST00000589795 4910 ntBASIC4.31□□□□□ -1.72
CD40P25942 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD40P25942 Y_RNA.100-201ENST00000363141 102 ntBASIC4.31□□□□□ -1.72
CD40P25942 Y_RNA.378-201ENST00000365652 113 ntBASIC4.31□□□□□ -1.72
CD40P25942 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 RNU6-1279P-201ENST00000383917 103 ntBASIC4.31□□□□□ -1.72
CD40P25942 RNA5SP187-201ENST00000384400 119 ntBASIC4.31□□□□□ -1.72
CD40P25942 AL592114.1-201ENST00000403842 483 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC079809.1-201ENST00000415468 276 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms