Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RN7SKP280-201ENST00000364196 304 ntBASIC3.63□□□□□ -1.83
CDH1P12830 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
CDH1P12830 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 RNU6-348P-201ENST00000384386 107 ntBASIC3.63□□□□□ -1.83
CDH1P12830 Y_RNA.517-201ENST00000384551 106 ntBASIC3.63□□□□□ -1.83
CDH1P12830 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH1P12830 SNORA57.1-201ENST00000391227 145 ntBASIC3.63□□□□□ -1.83
CDH1P12830 SOD2P1-201ENST00000396543 562 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
CDH1P12830 BTBD10P2-201ENST00000404779 676 ntBASIC3.63□□□□□ -1.83
CDH1P12830 MIR320C1-201ENST00000408566 88 ntBASIC3.63□□□□□ -1.83
CDH1P12830 FNDC3CP-201ENST00000420795 1155 ntBASIC3.63□□□□□ -1.83
CDH1P12830 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 USP9YP7-201ENST00000436723 430 ntBASIC3.63□□□□□ -1.83
CDH1P12830 RSU1P2-202ENST00000437884 485 ntBASIC3.63□□□□□ -1.83
CDH1P12830 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC239367.2-201ENST00000447309 705 ntBASIC3.63□□□□□ -1.83
CDH1P12830 USP9YP32-201ENST00000452432 430 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 MTCYBP1-201ENST00000454315 1119 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH1P12830 AC011825.1-201ENST00000484967 388 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC106872.3-201ENST00000495104 446 ntBASIC3.63□□□□□ -1.83
CDH1P12830 HMGB1P21-201ENST00000502313 581 ntBASIC3.63□□□□□ -1.83
CDH1P12830 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH1P12830 RNU6-405P-201ENST00000516637 110 ntBASIC3.63□□□□□ -1.83
CDH1P12830 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 AP002748.2-201ENST00000528671 348 ntBASIC3.63□□□□□ -1.83
CDH1P12830 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.63□□□□□ -1.83
CDH1P12830 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 AC092470.1-201ENST00000546187 132 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 MTND1P15-201ENST00000579262 949 ntBASIC3.63□□□□□ -1.83
CDH1P12830 MIR4307-201ENST00000582802 84 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH1P12830 AC015871.2-201ENST00000603605 948 ntBASIC3.63□□□□□ -1.83
CDH1P12830 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 AL159169.3-201ENST00000608871 561 ntBASIC3.63□□□□□ -1.83
CDH1P12830 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.63□□□□□ -1.83
CDH1P12830 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 Z99129.1-201ENST00000612510 255 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC099669.2-201ENST00000616549 437 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC009318.4-201ENST00000620496 486 ntBASIC3.63□□□□□ -1.83
CDH1P12830 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 AL445264.1-201ENST00000621719 171 ntBASIC3.63□□□□□ -1.83
CDH1P12830 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH1P12830 AL603839.4-201ENST00000624658 1005 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC093591.3-201ENST00000634516 308 ntBASIC3.63□□□□□ -1.83
CDH1P12830 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CDH1P12830 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 OTUD4P1-201ENST00000237841 3067 ntBASIC3.63□□□□□ -1.83
CDH1P12830 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 AC024560.2-201ENST00000507981 1497 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AL139811.1-201ENST00000424779 2299 ntBASIC3.62□□□□□ -1.83
CDH1P12830 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDH1P12830 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDH1P12830 RNU5E-5P-201ENST00000365379 116 ntBASIC3.62□□□□□ -1.83
CDH1P12830 RNU6-769P-201ENST00000384407 104 ntBASIC3.62□□□□□ -1.83
CDH1P12830 RPL32P23-201ENST00000397237 405 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AL031679.1-201ENST00000400616 525 ntBASIC3.62□□□□□ -1.83
CDH1P12830 MIR1305-201ENST00000408300 86 ntBASIC3.62□□□□□ -1.83
CDH1P12830 RN7SKP156-201ENST00000410308 342 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 RPL31P2-201ENST00000413849 377 ntBASIC3.62□□□□□ -1.83
CDH1P12830 RPL21P32-201ENST00000419877 477 ntBASIC3.62□□□□□ -1.83
CDH1P12830 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH1P12830 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.62□□□□□ -1.83
CDH1P12830 OFD1P18Y-201ENST00000420889 959 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 RPS3AP44-201ENST00000425466 790 ntBASIC3.62□□□□□ -1.83
CDH1P12830 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 AL035410.1-201ENST00000427409 427 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AL591419.1-201ENST00000427423 339 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC109583.1-201ENST00000432156 268 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC002381.1-201ENST00000447049 280 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms