Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC104417.1-201ENST00000523974 751 ntBASIC2.35□□□□□ -2.03
CD28P10747 MTCO3P15-201ENST00000526563 574 ntBASIC2.35□□□□□ -2.03
CD28P10747 AC087897.1-201ENST00000550134 156 ntBASIC2.35□□□□□ -2.03
CD28P10747 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.35□□□□□ -2.03
CD28P10747 AC122134.1-202ENST00000569111 1201 ntBASIC2.35□□□□□ -2.03
CD28P10747 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.35□□□□□ -2.03
CD28P10747 AC012669.1-201ENST00000603209 283 ntBASIC2.35□□□□□ -2.03
CD28P10747 AC010738.1-201ENST00000604970 987 ntBASIC2.35□□□□□ -2.03
CD28P10747 AL451074.6-201ENST00000608512 729 ntBASIC2.35□□□□□ -2.03
CD28P10747 AL591516.1-201ENST00000611326 274 ntBASIC2.35□□□□□ -2.03
CD28P10747 AL355810.1-201ENST00000614629 552 ntBASIC2.35□□□□□ -2.03
CD28P10747 CYCSP41-201ENST00000616920 296 ntBASIC2.35□□□□□ -2.03
CD28P10747 AF117829.1-206ENST00000621883 3802 ntBASIC2.35□□□□□ -2.03
CD28P10747 CYP3A51P-201ENST00000633513 256 ntBASIC2.35□□□□□ -2.03
CD28P10747 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CD28P10747 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.35□□□□□ -2.03
CD28P10747 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.35□□□□□ -2.03
CD28P10747 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.35□□□□□ -2.03
CD28P10747 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CD28P10747 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CD28P10747 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CD28P10747 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CD28P10747 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CD28P10747 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 MAPK10-362ENST00000641864 4484 ntBASIC2.34□□□□□ -2.03
CD28P10747 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CD28P10747 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CD28P10747 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CD28P10747 MIR148B-201ENST00000362252 99 ntBASIC2.34□□□□□ -2.03
CD28P10747 RNU6-492P-201ENST00000363035 104 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC016769.3-201ENST00000396562 315 ntBASIC2.34□□□□□ -2.03
CD28P10747 UBE2V1P2-201ENST00000397758 440 ntBASIC2.34□□□□□ -2.03
CD28P10747 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 MTCO3P1-205ENST00000422088 832 ntBASIC2.34□□□□□ -2.03
CD28P10747 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CD28P10747 AL139132.1-201ENST00000431587 344 ntBASIC2.34□□□□□ -2.03
CD28P10747 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 AC117440.1-201ENST00000474107 571 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 AC008837.1-201ENST00000511513 412 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC091826.1-201ENST00000514065 313 ntBASIC2.34□□□□□ -2.03
CD28P10747 RNU6-27P-201ENST00000516146 107 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.34□□□□□ -2.03
CD28P10747 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CD28P10747 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.34□□□□□ -2.03
CD28P10747 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.34□□□□□ -2.03
CD28P10747 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.34□□□□□ -2.03
CD28P10747 GTF3AP2-201ENST00000557014 266 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.34□□□□□ -2.03
CD28P10747 AC090666.1-201ENST00000578241 445 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.34□□□□□ -2.03
CD28P10747 BDH2P1-201ENST00000602288 736 ntBASIC2.34□□□□□ -2.03
CD28P10747 AL109653.1-201ENST00000603091 248 ntBASIC2.34□□□□□ -2.03
CD28P10747 AL133393.1-201ENST00000603277 287 ntBASIC2.34□□□□□ -2.03
CD28P10747 RPL23AP92-201ENST00000603609 255 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC006023.1-201ENST00000603944 259 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC055876.5-201ENST00000605667 259 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC124016.2-201ENST00000610058 665 ntBASIC2.34□□□□□ -2.03
CD28P10747 AC091925.2-201ENST00000625059 256 ntBASIC2.34□□□□□ -2.03
CD28P10747 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.34□□□□□ -2.04
CD28P10747 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.34□□□□□ -2.04
CD28P10747 AC108206.1-201ENST00000570186 4159 ntBASIC2.34□□□□□ -2.04
CD28P10747 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CD28P10747 SGO1P2-201ENST00000429458 1589 ntBASIC2.33□□□□□ -2.04
CD28P10747 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CD28P10747 OR5J1P-201ENST00000313544 939 ntBASIC2.33□□□□□ -2.04
CD28P10747 RNU6-50P-201ENST00000362356 103 ntBASIC2.33□□□□□ -2.04
CD28P10747 DYNLT3P1-201ENST00000378574 347 ntBASIC2.33□□□□□ -2.04
CD28P10747 RNU6-657P-201ENST00000383904 107 ntBASIC2.33□□□□□ -2.04
CD28P10747 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CD28P10747 RNU6-1300P-201ENST00000391046 108 ntBASIC2.33□□□□□ -2.04
CD28P10747 AC245054.2-201ENST00000415639 319 ntBASIC2.33□□□□□ -2.04
CD28P10747 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.33□□□□□ -2.04
CD28P10747 YPEL5P1-201ENST00000419731 367 ntBASIC2.33□□□□□ -2.04
CD28P10747 RPL21P32-201ENST00000419877 477 ntBASIC2.33□□□□□ -2.04
CD28P10747 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.33□□□□□ -2.04
CD28P10747 USP9YP36-201ENST00000424581 829 ntBASIC2.33□□□□□ -2.04
CD28P10747 DPPA2P1-201ENST00000428060 556 ntBASIC2.33□□□□□ -2.04
CD28P10747 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 AC092393.1-201ENST00000439625 742 ntBASIC2.33□□□□□ -2.04
CD28P10747 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 MTCYBP42-201ENST00000444653 1130 ntBASIC2.33□□□□□ -2.04
CD28P10747 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CD28P10747 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 USP9YP34-201ENST00000453983 808 ntBASIC2.33□□□□□ -2.04
CD28P10747 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 AC004924.1-201ENST00000480160 781 ntBASIC2.33□□□□□ -2.04
CD28P10747 PRELID3BP6-201ENST00000503839 571 ntBASIC2.33□□□□□ -2.04
CD28P10747 VN1R104P-201ENST00000505115 1009 ntBASIC2.33□□□□□ -2.04
CD28P10747 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.33□□□□□ -2.04
CD28P10747 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CD28P10747 AC111000.2-201ENST00000507775 550 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms