| GLI3 | P10071 | ATXN3-248 | ENST00000558190 | 26812 nt | APPRIS P1 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RNA5SP190-201 | ENST00000365222 | 118 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RPL23AP76-201 | ENST00000441860 | 458 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNORD108-201 | ENST00000459332 | 71 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC017007.3-201 | ENST00000479865 | 435 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC025244.2-201 | ENST00000509215 | 422 nt | TSL 3 BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RNA5SP490-201 | ENST00000517141 | 136 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC006270.2-201 | ENST00000578523 | 652 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC010511.1-202 | ENST00000590229 | 573 nt | TSL 4 BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL353811.1-202 | ENST00000602614 | 618 nt | TSL 3 BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | DMD-203 | ENST00000357033 | 13956 nt | APPRIS P3 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | DCAF13P1-201 | ENST00000495256 | 1330 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | GLIPR1-201 | ENST00000266659 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | ATP2B1-201 | ENST00000261173 | 6777 nt | APPRIS P1 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| GLI3 | P10071 | OR5T2-201 | ENST00000313264 | 1248 nt | APPRIS P2 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | MIR591-201 | ENST00000385290 | 95 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNORA40.18-201 | ENST00000391200 | 128 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC097717.1-233 | ENST00000413557 | 460 nt | TSL 3 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC002386.1-201 | ENST00000436714 | 398 nt | TSL 2 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC069277.2-201 | ENST00000454211 | 432 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNX5P1-201 | ENST00000505757 | 1041 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AP004242.1-201 | ENST00000533701 | 349 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL161713.1-201 | ENST00000555538 | 145 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNORA50A-202 | ENST00000629536 | 136 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | KCNT2-202 | ENST00000367433 | 5883 nt | TSL 1 (best) BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | HAS2-201 | ENST00000303924 | 4190 nt | APPRIS P1 TSL 1 (best) BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC027514.1-201 | ENST00000588561 | 1603 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC110792.3-201 | ENST00000595906 | 1614 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RNU6ATAC38P-201 | ENST00000408119 | 126 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL357140.2-201 | ENST00000445884 | 440 nt | TSL 3 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | LINC02488-201 | ENST00000504287 | 652 nt | TSL 2 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AP001960.1-201 | ENST00000506494 | 658 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AMZ2P1-203 | ENST00000565833 | 850 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC019131.2-201 | ENST00000609071 | 870 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC013562.2-201 | ENST00000611632 | 603 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | ZNF93-209 | ENST00000638737 | 1020 nt | TSL 5 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.74 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC010329.2-201 | ENST00000595195 | 2737 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL161431.1-201 | ENST00000618966 | 4205 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | CHD9-203 | ENST00000447540 | 11509 nt | TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | DEFB106A-201 | ENST00000335186 | 303 nt | APPRIS P1 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNORA48.3-201 | ENST00000391081 | 134 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RPS15AP12-201 | ENST00000419498 | 388 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RPS7P5-201 | ENST00000441482 | 581 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | FABP5P13-201 | ENST00000452144 | 328 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC025566.1-201 | ENST00000477153 | 490 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC140059.1-201 | ENST00000489238 | 361 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | GYPA-203 | ENST00000503627 | 318 nt | TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | IGHV3-76-201 | ENST00000522465 | 295 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AP003049.2-202 | ENST00000532929 | 803 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AP005433.1-202 | ENST00000580845 | 521 nt | TSL 4 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC091488.1-201 | ENST00000604239 | 660 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC034236.3-201 | ENST00000605999 | 461 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC016877.3-201 | ENST00000606778 | 504 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | FER-201 | ENST00000281092 | 12119 nt | APPRIS P1 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SACS-201 | ENST00000382292 | 15324 nt | APPRIS P1 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | MACF1-204 | ENST00000372915 | 23440 nt | APPRIS ALT2 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| GLI3 | P10071 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | Y_RNA.62-201 | ENST00000362840 | 99 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RNA5SP344-201 | ENST00000411081 | 104 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AP000855.1-201 | ENST00000433210 | 636 nt | TSL 2 BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AL591719.1-201 | ENST00000444669 | 744 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | RPL23AP63-201 | ENST00000498752 | 471 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | snoZ278.1-201 | ENST00000517059 | 112 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC087623.1-201 | ENST00000533301 | 377 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | OR4T1P-201 | ENST00000554933 | 911 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | ZNF192P1-203 | ENST00000565888 | 810 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | GPR34-203 | ENST00000620846 | 1282 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | AC009950.2-201 | ENST00000636548 | 183 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | FAM46D-201 | ENST00000308293 | 3011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | MTND4P35-201 | ENST00000604257 | 1375 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | TAB2-205 | ENST00000538427 | 4240 nt | APPRIS P1 TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| GLI3 | P10071 | OR51L1-203 | ENST00000641819 | 7300 nt | APPRIS P1 BASIC | 2.71 | □□□□□ -1.97 | | |
| GLI3 | P10071 | SNORA51.11-201 | ENST00000384442 | 131 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | PGAP1-203 | ENST00000409188 | 1246 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AC006333.1-201 | ENST00000422401 | 410 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | MTCO1P43-201 | ENST00000431831 | 488 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | OR6C72P-201 | ENST00000451403 | 892 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AP000705.1-201 | ENST00000454567 | 350 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AC073359.1-201 | ENST00000486545 | 521 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AC113398.2-201 | ENST00000507630 | 558 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | HMGB1P1-201 | ENST00000522557 | 636 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | BLOC1S6-206 | ENST00000564765 | 706 nt | TSL 4 BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | NF1P5-201 | ENST00000588287 | 448 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | TUG1-202 | ENST00000521091 | 2110 nt | TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | PLSCR5-201 | ENST00000443512 | 1969 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AL160411.1-201 | ENST00000429853 | 400 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| GLI3 | P10071 | TRAPPC2P9-201 | ENST00000434556 | 343 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| GLI3 | P10071 | LINC01317-202 | ENST00000442026 | 677 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AC087071.2-201 | ENST00000483283 | 575 nt | TSL 4 BASIC | 2.7 | □□□□□ -1.98 | | |
| GLI3 | P10071 | LINC02229-201 | ENST00000508486 | 661 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| GLI3 | P10071 | AL352955.1-201 | ENST00000555490 | 332 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |