Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OFD1P18Y-201ENST00000420889 959 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC096632.1-201ENST00000427395 310 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC4P09017 FTH1P1-201ENST00000437933 532 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC4P09017 PTGES3P1-201ENST00000439531 483 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL662791.1-201ENST00000441992 928 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 RAB11AP1-201ENST00000442978 646 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 HSPE1P28-201ENST00000443139 211 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 HMGN3P1-201ENST00000453847 193 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC244505.3-201ENST00000454598 187 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 AP001207.1-201ENST00000524051 481 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC4P09017 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 AC092470.1-201ENST00000546187 132 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 EIF4BP1-201ENST00000554881 351 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC4P09017 LARP7P3-201ENST00000579888 337 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
HOXC4P09017 VN1R78P-201ENST00000597393 564 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 NIFKP6-201ENST00000598115 845 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AL139344.1-201ENST00000605228 195 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC004832.5-201ENST00000608677 401 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC013468.1-201ENST00000608680 598 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC092954.1-201ENST00000609121 445 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC231759.1-201ENST00000616455 597 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC123767.1-202ENST00000620407 817 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC4P09017 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXC4P09017 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.96□□□□□ -1.93
HOXC4P09017 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC4P09017 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC4P09017 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RNU6-374P-201ENST00000364146 108 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RNU4-28P-201ENST00000364739 141 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RNU6-1226P-201ENST00000384317 107 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 MT-TC-201ENST00000387405 66 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RPL7P27-201ENST00000403775 720 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL031121.1-201ENST00000406553 254 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RNU6-77P-201ENST00000410554 91 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 BTF3P8-201ENST00000414577 526 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 OR4K6P-201ENST00000416478 897 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 MTND4P3-201ENST00000417829 541 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 PAICSP7-201ENST00000419829 962 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 RPL21P66-201ENST00000426566 466 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 OR2AS1P-201ENST00000427827 319 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC4P09017 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 NANOGP2-201ENST00000435391 727 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 MTND2P22-201ENST00000444325 1033 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 SEPT14P24-201ENST00000447236 180 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 HMGN2P16-201ENST00000456802 261 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RNU7-140P-201ENST00000459546 60 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RPL21P8-201ENST00000465083 535 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RPS26P21-201ENST00000475397 348 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 RPL21P131-201ENST00000497298 483 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 RNU6-1073P-201ENST00000517182 106 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC104417.1-201ENST00000523974 751 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC109635.4-202ENST00000531666 412 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC4P09017 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 AC078899.3-201ENST00000599065 212 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC4P09017 AP002906.1-201ENST00000603405 233 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL590282.1-201ENST00000610379 1136 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AL121895.2-201ENST00000619558 447 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AC013470.4-201ENST00000619978 986 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 AP003485.2-201ENST00000623636 610 ntBASIC2.96□□□□□ -1.94
HOXC4P09017 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC4P09017 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
HOXC4P09017 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms