Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN9O95484 AC233728.2-201ENST00000425348 757 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 MTCO1P39-201ENST00000426148 480 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.95□□□□□ -1.94
CLDN9O95484 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN9O95484 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 AC011242.1-201ENST00000433596 1158 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 MTCYBP34-201ENST00000439552 670 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AC079776.3-201ENST00000450665 370 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 RNA5SP310-201ENST00000459084 116 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 RN7SL601P-201ENST00000471221 293 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN9O95484 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.95□□□□□ -1.94
CLDN9O95484 RNU6-1261P-201ENST00000517194 104 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 ERHP1-201ENST00000523006 310 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AP001804.3-201ENST00000525146 880 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN9O95484 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 MED28P6-201ENST00000558776 231 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 BNIP3P24-201ENST00000593398 557 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN9O95484 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN9O95484 AC010975.3-201ENST00000618727 978 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AP003476.1-201ENST00000623984 516 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 MKKS-204ENST00000639674 192 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN9O95484 Y_RNA.25-201ENST00000362528 102 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 DYNLT3P1-201ENST00000378574 347 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 U3.42-201ENST00000408746 214 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 RNA5SP120-201ENST00000410900 112 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC096533.1-201ENST00000411645 353 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN9O95484 AL137014.1-201ENST00000420490 1226 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN9O95484 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 OR2B8P-201ENST00000432841 938 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 SNRPEP4-201ENST00000435815 279 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 CYCSP32-201ENST00000440548 321 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL591503.2-201ENST00000442314 1005 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN9O95484 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 AC006483.1-201ENST00000487308 313 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL358832.1-201ENST00000497800 389 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC008427.1-201ENST00000503102 655 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN9O95484 MTND4LP22-201ENST00000508209 276 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 RNU6-1028P-201ENST00000517164 93 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.94□□□□□ -1.94
CLDN9O95484 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 GTF2IP8-201ENST00000560687 584 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN9O95484 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.94□□□□□ -1.94
CLDN9O95484 AL031985.2-201ENST00000600955 480 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL022099.1-201ENST00000604551 712 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 MIR7112-201ENST00000616126 65 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 CYCSP41-201ENST00000616920 296 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AL356585.4-201ENST00000623078 1229 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 AC126544.2-201ENST00000625174 749 ntBASIC2.94□□□□□ -1.94
CLDN9O95484 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN9O95484 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN9O95484 OR5BR1P-201ENST00000524992 1330 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN9O95484 AC110774.1-201ENST00000623567 2018 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN9O95484 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN9O95484 RNU6-1155P-201ENST00000363554 107 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 Y_RNA.500-201ENST00000384466 111 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 RPS15AP38-201ENST00000413110 372 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.93□□□□□ -1.94
CLDN9O95484 USP9YP21-201ENST00000420603 432 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 RPL7P30-201ENST00000420888 709 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AL158156.1-201ENST00000422509 473 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 PTP4A1P7-201ENST00000423476 514 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN9O95484 USP9YP34-201ENST00000453983 808 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN9O95484 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN9O95484 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CLDN9O95484 POU5F1P7-201ENST00000508759 541 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 RNU1-103P-201ENST00000516502 125 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN9O95484 DEFB130C-202ENST00000530001 230 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms