Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SNORA11.4-201ENST00000408823 129 ntBASIC3.34□□□□□ -1.87
PCF11O94913 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.34□□□□□ -1.87
PCF11O94913 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.34□□□□□ -1.87
PCF11O94913 NF1P5-201ENST00000588287 448 ntBASIC3.34□□□□□ -1.87
PCF11O94913 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.34□□□□□ -1.87
PCF11O94913 AC245517.5-201ENST00000611529 162 ntBASIC3.34□□□□□ -1.87
PCF11O94913 AC073348.1-201ENST00000623002 331 ntBASIC3.34□□□□□ -1.87
PCF11O94913 AC092159.4-201ENST00000624944 550 ntBASIC3.34□□□□□ -1.87
PCF11O94913 AL161431.1-201ENST00000618966 4205 ntBASIC3.34□□□□□ -1.87
PCF11O94913 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.87
PCF11O94913 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCF11O94913 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.34□□□□□ -1.88
PCF11O94913 BTF3P4-201ENST00000418852 495 ntBASIC3.34□□□□□ -1.88
PCF11O94913 DNAJC19P4-201ENST00000440115 345 ntBASIC3.34□□□□□ -1.88
PCF11O94913 AL118520.1-201ENST00000450770 291 ntBASIC3.34□□□□□ -1.88
PCF11O94913 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.34□□□□□ -1.88
PCF11O94913 RNU6-319P-201ENST00000516025 108 ntBASIC3.34□□□□□ -1.88
PCF11O94913 MTND5P21-201ENST00000531961 522 ntBASIC3.34□□□□□ -1.88
PCF11O94913 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.34□□□□□ -1.88
PCF11O94913 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.34□□□□□ -1.88
PCF11O94913 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.34□□□□□ -1.88
PCF11O94913 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.34□□□□□ -1.88
PCF11O94913 AC013562.2-201ENST00000611632 603 ntBASIC3.34□□□□□ -1.88
PCF11O94913 AC139769.3-201ENST00000618383 175 ntBASIC3.34□□□□□ -1.88
PCF11O94913 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCF11O94913 RNU6-167P-201ENST00000384292 106 ntBASIC3.33□□□□□ -1.88
PCF11O94913 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.33□□□□□ -1.88
PCF11O94913 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.33□□□□□ -1.88
PCF11O94913 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.33□□□□□ -1.88
PCF11O94913 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.33□□□□□ -1.88
PCF11O94913 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
PCF11O94913 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.33□□□□□ -1.88
PCF11O94913 MTCO1P30-201ENST00000515244 580 ntBASIC3.33□□□□□ -1.88
PCF11O94913 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.33□□□□□ -1.88
PCF11O94913 AC011611.5-201ENST00000552477 578 ntBASIC3.33□□□□□ -1.88
PCF11O94913 AC006270.2-201ENST00000578523 652 ntBASIC3.33□□□□□ -1.88
PCF11O94913 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.33□□□□□ -1.88
PCF11O94913 AC012531.5-201ENST00000611375 151 ntBASIC3.33□□□□□ -1.88
PCF11O94913 AL359198.2-201ENST00000611836 194 ntBASIC3.33□□□□□ -1.88
PCF11O94913 AL589935.2-201ENST00000616471 1231 ntBASIC3.33□□□□□ -1.88
PCF11O94913 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
PCF11O94913 MIR6132-201ENST00000622083 109 ntBASIC3.33□□□□□ -1.88
PCF11O94913 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.33□□□□□ -1.88
PCF11O94913 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCF11O94913 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.32□□□□□ -1.88
PCF11O94913 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
PCF11O94913 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCF11O94913 RPS15AP12-201ENST00000419498 388 ntBASIC3.32□□□□□ -1.88
PCF11O94913 ELOCP6-201ENST00000429066 328 ntBASIC3.32□□□□□ -1.88
PCF11O94913 AL591719.1-201ENST00000444669 744 ntBASIC3.32□□□□□ -1.88
PCF11O94913 ELOCP12-201ENST00000458706 328 ntBASIC3.32□□□□□ -1.88
PCF11O94913 RPL21P103-201ENST00000479921 488 ntBASIC3.32□□□□□ -1.88
PCF11O94913 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.32□□□□□ -1.88
PCF11O94913 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.32□□□□□ -1.88
PCF11O94913 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
PCF11O94913 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCF11O94913 SNORA67.3-201ENST00000384366 140 ntBASIC3.31□□□□□ -1.88
PCF11O94913 HMGB1P10-201ENST00000395823 563 ntBASIC3.31□□□□□ -1.88
PCF11O94913 CCNB2P1-201ENST00000399411 1150 ntBASIC3.31□□□□□ -1.88
PCF11O94913 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.31□□□□□ -1.88
PCF11O94913 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.31□□□□□ -1.88
PCF11O94913 RPL38P4-201ENST00000502376 214 ntBASIC3.31□□□□□ -1.88
PCF11O94913 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.31□□□□□ -1.88
PCF11O94913 OR4T1P-201ENST00000554933 911 ntBASIC3.31□□□□□ -1.88
PCF11O94913 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.31□□□□□ -1.88
PCF11O94913 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.31□□□□□ -1.88
PCF11O94913 AC007687.1-201ENST00000602704 304 ntBASIC3.31□□□□□ -1.88
PCF11O94913 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.31□□□□□ -1.88
PCF11O94913 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCF11O94913 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCF11O94913 RNU6-661P-201ENST00000362409 107 ntBASIC3.3□□□□□ -1.88
PCF11O94913 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
PCF11O94913 HMGB1P13-201ENST00000406019 642 ntBASIC3.3□□□□□ -1.88
PCF11O94913 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.3□□□□□ -1.88
PCF11O94913 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.3□□□□□ -1.88
PCF11O94913 CCNHP1-201ENST00000513311 678 ntBASIC3.3□□□□□ -1.88
PCF11O94913 RNU4-18P-201ENST00000516751 149 ntBASIC3.3□□□□□ -1.88
PCF11O94913 AP004242.1-201ENST00000533701 349 ntBASIC3.3□□□□□ -1.88
PCF11O94913 AC108479.2-201ENST00000617314 601 ntBASIC3.3□□□□□ -1.88
PCF11O94913 uc_338.9-201ENST00000617424 182 ntBASIC3.3□□□□□ -1.88
PCF11O94913 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.3□□□□□ -1.88
PCF11O94913 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCF11O94913 RNU2-37P-201ENST00000410695 177 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AC013404.1-201ENST00000413068 249 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.29□□□□□ -1.88
PCF11O94913 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.29□□□□□ -1.88
PCF11O94913 OR5H4P-201ENST00000510851 923 ntBASIC3.29□□□□□ -1.88
PCF11O94913 TBCAP3-201ENST00000512475 312 ntBASIC3.29□□□□□ -1.88
PCF11O94913 RNU2-58P-201ENST00000516403 183 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.29□□□□□ -1.88
PCF11O94913 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.29□□□□□ -1.88
PCF11O94913 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
PCF11O94913 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.29□□□□□ -1.88
PCF11O94913 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCF11O94913 U8.10-201ENST00000384260 133 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms