Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC0.9□□□□□ -2.27
USH2AO75445 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.9□□□□□ -2.27
USH2AO75445 AC016727.2-201ENST00000603988 621 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC105429.2-201ENST00000610567 517 ntBASIC0.9□□□□□ -2.27
USH2AO75445 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.9□□□□□ -2.27
USH2AO75445 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 MTND5P19-201ENST00000424872 1794 ntBASIC0.9□□□□□ -2.27
USH2AO75445 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC0.9□□□□□ -2.27
USH2AO75445 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
USH2AO75445 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 AC007256.1-201ENST00000392253 2765 ntBASIC0.9□□□□□ -2.27
USH2AO75445 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
USH2AO75445 RNA5SP257-201ENST00000363023 116 ntBASIC0.9□□□□□ -2.27
USH2AO75445 MIR193B-201ENST00000384907 83 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.9□□□□□ -2.27
USH2AO75445 AIMP1P1-201ENST00000418670 937 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC0.9□□□□□ -2.27
USH2AO75445 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC0.9□□□□□ -2.27
USH2AO75445 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC0.9□□□□□ -2.27
USH2AO75445 SETP1-201ENST00000556014 845 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC103968.1-201ENST00000557841 573 ntBASIC0.9□□□□□ -2.27
USH2AO75445 HMGN2P47-201ENST00000559378 272 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.9□□□□□ -2.27
USH2AO75445 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC0.9□□□□□ -2.27
USH2AO75445 OR5H15-201ENST00000383696 930 ntBASIC0.9□□□□□ -2.27
USH2AO75445 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 RPL36AP33-201ENST00000450395 310 ntBASIC0.9□□□□□ -2.27
USH2AO75445 HMGB1P19-201ENST00000517578 577 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC0.9□□□□□ -2.27
USH2AO75445 AC103810.8-201ENST00000607347 118 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC243773.3-201ENST00000613270 256 ntBASIC0.9□□□□□ -2.27
USH2AO75445 CDC27P3-201ENST00000635418 1910 ntBASIC0.9□□□□□ -2.27
USH2AO75445 AC068700.1-201ENST00000565862 3754 ntBASIC0.9□□□□□ -2.27
USH2AO75445 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 RNU6-105P-201ENST00000363909 104 ntBASIC0.89□□□□□ -2.27
USH2AO75445 EI24P1-201ENST00000416584 867 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AL445685.2-201ENST00000422551 342 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC114801.2-201ENST00000503825 781 ntBASIC0.89□□□□□ -2.27
USH2AO75445 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
USH2AO75445 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 AC005034.5-201ENST00000604219 466 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC008121.2-201ENST00000614647 523 ntBASIC0.89□□□□□ -2.27
USH2AO75445 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 SNORD21-201ENST00000383953 95 ntBASIC0.89□□□□□ -2.27
USH2AO75445 MIR708-201ENST00000390708 88 ntBASIC0.89□□□□□ -2.27
USH2AO75445 VN1R31P-201ENST00000417498 730 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC127526.1-201ENST00000417526 366 ntBASIC0.89□□□□□ -2.27
USH2AO75445 HMGB1P27-201ENST00000431429 603 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 AC011472.4-201ENST00000615848 491 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 MIR6086-201ENST00000638065 55 ntBASIC0.89□□□□□ -2.27
USH2AO75445 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
USH2AO75445 OR4G11P-202ENST00000642116 1414 ntBASIC0.89□□□□□ -2.27
USH2AO75445 Y_RNA.294-201ENST00000364916 102 ntBASIC0.89□□□□□ -2.27
USH2AO75445 DEFB109C-201ENST00000382575 264 ntBASIC0.89□□□□□ -2.27
USH2AO75445 DEFB109B-201ENST00000382656 264 ntBASIC0.89□□□□□ -2.27
USH2AO75445 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC079776.3-201ENST00000450665 370 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.89□□□□□ -2.27
USH2AO75445 AC078899.5-201ENST00000612475 178 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC093591.3-201ENST00000634516 308 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC084035.1-201ENST00000634543 607 ntBASIC0.89□□□□□ -2.27
USH2AO75445 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 RNU1-139P-201ENST00000391307 165 ntBASIC0.89□□□□□ -2.27
USH2AO75445 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC0.89□□□□□ -2.27
USH2AO75445 SNORA25.15-201ENST00000516487 89 ntBASIC0.89□□□□□ -2.27
USH2AO75445 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 MIR6766-201ENST00000622641 72 ntBASIC0.89□□□□□ -2.27
USH2AO75445 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC0.89□□□□□ -2.27
USH2AO75445 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH2AO75445 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
USH2AO75445 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
USH2AO75445 AC007560.1-201ENST00000426912 237 ntBASIC0.88□□□□□ -2.27
USH2AO75445 YWHAZP7-201ENST00000436906 631 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC105402.2-201ENST00000438503 358 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms