Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 AC093849.1-201ENST00000563631 2209 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 MAPK10-323ENST00000641493 3207 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
GFRA3O60609 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
GFRA3O60609 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 RNU6-1301P-201ENST00000362724 104 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RNU6-211P-201ENST00000384047 107 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RNU6-49P-201ENST00000384256 107 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RNU6-592P-201ENST00000411333 103 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 RPL23AP38-201ENST00000423801 469 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AL031737.1-201ENST00000450125 223 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC234775.1-201ENST00000454247 670 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 SNORD121B-201ENST00000458838 81 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RNU6-521P-201ENST00000516663 105 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA3O60609 AL133271.1-201ENST00000538229 291 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 NACAP3-201ENST00000552100 481 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA3O60609 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA3O60609 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 MIR4423-201ENST00000580922 80 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 RPL23AP92-201ENST00000603609 255 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC008745.1-201ENST00000604064 271 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC083809.1-201ENST00000615051 472 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC106754.2-201ENST00000623006 233 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AC120057.5-201ENST00000623840 154 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 AL132640.3-201ENST00000630473 177 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 CYP3A51P-201ENST00000633513 256 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 CASC19-204ENST00000641001 2055 ntBASIC5.81□□□□□ -1.48
GFRA3O60609 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA3O60609 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA3O60609 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
GFRA3O60609 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
GFRA3O60609 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 RNU6-199P-201ENST00000362954 107 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 RNU6-640P-201ENST00000363693 105 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 RNU4-7P-201ENST00000364758 141 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 SNORD78.1-201ENST00000390866 65 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 SNORA12.2-201ENST00000391040 156 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 AL023807.1-201ENST00000407932 359 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.8□□□□□ -1.48
GFRA3O60609 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.8□□□□□ -1.48
GFRA3O60609 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.8□□□□□ -1.48
GFRA3O60609 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 RN7SL432P-201ENST00000484057 298 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 IGKV2-36-201ENST00000519999 223 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 AK6P2-201ENST00000549020 471 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 AC008749.1-201ENST00000597650 306 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 AC234771.5-201ENST00000600161 514 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.8□□□□□ -1.48
GFRA3O60609 AL645944.1-201ENST00000603857 493 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 AC020765.1-201ENST00000604296 328 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 AL450226.2-201ENST00000622913 439 ntBASIC5.8□□□□□ -1.48
GFRA3O60609 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.8□□□□□ -1.48
GFRA3O60609 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.8□□□□□ -1.48
GFRA3O60609 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GFRA3O60609 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GFRA3O60609 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.8□□□□□ -1.48
GFRA3O60609 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms