Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC090897.3-201ENST00000636973 1157 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC010733.2-201ENST00000589496 5702 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LCMT2O60294 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LCMT2O60294 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LCMT2O60294 AC007496.3-201ENST00000624987 3443 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LCMT2O60294 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LCMT2O60294 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LCMT2O60294 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LCMT2O60294 RNA5SP267-201ENST00000364893 126 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
LCMT2O60294 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LCMT2O60294 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.14□□□□□ -1.91
LCMT2O60294 Y_RNA.465-201ENST00000384293 102 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
LCMT2O60294 HMGB3P23-201ENST00000414981 585 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 ELOCP9-201ENST00000418624 239 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 USP9YP11-201ENST00000427537 717 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
LCMT2O60294 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.14□□□□□ -1.91
LCMT2O60294 AC084290.1-201ENST00000434995 374 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 HMGB3P11-201ENST00000440127 604 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 FGF7P5-201ENST00000441829 291 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
LCMT2O60294 TRGVB-201ENST00000453257 471 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AL445669.2-201ENST00000454425 421 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.14□□□□□ -1.91
LCMT2O60294 MTCYBP17-201ENST00000503579 789 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC091951.3-201ENST00000504093 246 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 WBP1LP4-201ENST00000505043 344 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.14□□□□□ -1.91
LCMT2O60294 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.14□□□□□ -1.91
LCMT2O60294 AC074250.1-201ENST00000511117 192 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.14□□□□□ -1.91
LCMT2O60294 RNU6-311P-201ENST00000516224 102 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC022690.1-201ENST00000526681 550 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.14□□□□□ -1.91
LCMT2O60294 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.14□□□□□ -1.91
LCMT2O60294 ZNF415P1-201ENST00000582279 1166 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.14□□□□□ -1.91
LCMT2O60294 AC069304.2-201ENST00000605154 435 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC008962.1-201ENST00000605729 304 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AL451074.6-201ENST00000608512 729 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC131235.4-201ENST00000609288 620 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.14□□□□□ -1.91
LCMT2O60294 AC092106.3-201ENST00000611308 722 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC009464.1-201ENST00000615731 469 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 SNORD39.4-201ENST00000620099 78 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 AC004777.1-201ENST00000624317 287 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 CYP3A51P-201ENST00000633513 256 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LCMT2O60294 CDR1-202ENST00000625883 1485 ntBASIC3.14□□□□□ -1.91
LCMT2O60294 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LCMT2O60294 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
LCMT2O60294 ZNF807-201ENST00000328088 1707 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LCMT2O60294 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LCMT2O60294 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
LCMT2O60294 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LCMT2O60294 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
LCMT2O60294 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 RPS7P13-201ENST00000413955 498 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC012065.2-201ENST00000421295 375 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LCMT2O60294 AC005326.1-201ENST00000429197 123 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 MTCO2P20-201ENST00000437339 673 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 COX7BP2-201ENST00000437976 242 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 CR769776.1-201ENST00000441254 787 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.13□□□□□ -1.91
LCMT2O60294 snoU109.4-201ENST00000458953 143 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 RPL7P49-201ENST00000471402 708 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC108729.1-201ENST00000487812 947 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC021146.8-201ENST00000507455 733 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC116353.3-201ENST00000511215 249 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC104986.1-201ENST00000517978 436 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AP001636.2-201ENST00000525517 696 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AL391156.1-201ENST00000554965 554 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.13□□□□□ -1.91
LCMT2O60294 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms