Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 AC068870.1-201ENST00000563737 2455 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 PWAR1-201ENST00000624188 2414 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC116158.1-201ENST00000560231 2129 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 AC007842.1-201ENST00000597336 2039 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
ACTN4O43707 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 RNU6-1243P-201ENST00000364028 107 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 RNU6-1303P-201ENST00000364841 107 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 MIR1203-201ENST00000408812 85 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 Y_RNA.592-201ENST00000410274 109 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 AL354766.1-201ENST00000423396 542 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.37□□□□□ -1.39
ACTN4O43707 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 AC004866.2-201ENST00000438285 481 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC022034.3-201ENST00000471393 478 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.37□□□□□ -1.39
ACTN4O43707 RN7SL717P-201ENST00000478343 297 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC021678.3-201ENST00000517893 476 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 MRPS36P4-201ENST00000534436 298 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 HMGN2P47-201ENST00000559378 272 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC018809.2-201ENST00000602436 3823 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 Z83818.1-201ENST00000603584 150 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 MIR6780B-201ENST00000610307 79 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.37□□□□□ -1.39
ACTN4O43707 AC093671.1-201ENST00000624981 2929 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 AC104964.3-201ENST00000606115 2860 ntBASIC6.37□□□□□ -1.39
ACTN4O43707 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
ACTN4O43707 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ACTN4O43707 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
ACTN4O43707 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.36□□□□□ -1.39
ACTN4O43707 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 RNA5SP30-201ENST00000365552 115 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 Y_RNA.458-201ENST00000384240 102 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 SNORD73A-201ENST00000386062 65 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 RNU6-735P-201ENST00000410612 107 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 EI24P4-201ENST00000423683 1078 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AC091286.1-201ENST00000431233 461 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AC008264.1-201ENST00000447612 367 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AC091021.1-201ENST00000468051 388 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 RPL21P6-201ENST00000479171 504 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 OR51K1P-201ENST00000510214 950 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AL359273.1-201ENST00000510918 627 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AC090151.1-201ENST00000520784 730 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.36□□□□□ -1.39
ACTN4O43707 SULT1C2P2-201ENST00000562517 294 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.36□□□□□ -1.39
ACTN4O43707 AC174048.1-201ENST00000603389 144 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 MIR6133-201ENST00000617057 108 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 AC116667.1-201ENST00000604855 2072 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.36□□□□□ -1.39
ACTN4O43707 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 AP000560.1-201ENST00000624150 1937 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 AC016745.2-201ENST00000608834 3443 ntBASIC6.36□□□□□ -1.39
ACTN4O43707 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
ACTN4O43707 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ACTN4O43707 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
ACTN4O43707 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.36□□□□□ -1.39
ACTN4O43707 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
ACTN4O43707 AC009643.2-201ENST00000603543 1448 ntBASIC6.35□□□□□ -1.39
ACTN4O43707 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ACTN4O43707 HAUS6P2-201ENST00000433254 2404 ntBASIC6.35□□□□□ -1.39
ACTN4O43707 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.35□□□□□ -1.39
ACTN4O43707 AP001148.1-201ENST00000624124 2359 ntBASIC6.35□□□□□ -1.39
ACTN4O43707 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ACTN4O43707 RN7SKP145-201ENST00000363291 303 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms