Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC233279.1-201ENST00000455300 423 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RNA5SP246-201ENST00000458909 119 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RPL7P15-201ENST00000461190 712 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RPL7P19-201ENST00000469948 618 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SRGAP3O43295 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.21□□□□□ -1.58
SRGAP3O43295 RNU6-488P-201ENST00000515918 99 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RNU6-327P-201ENST00000516270 127 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AC011611.1-201ENST00000552179 197 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AC136624.4-201ENST00000573044 370 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AC022655.2-201ENST00000577280 318 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AC115085.1-201ENST00000588924 229 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SRGAP3O43295 AC011468.4-201ENST00000603942 409 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AL133255.1-201ENST00000606374 441 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
SRGAP3O43295 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRGAP3O43295 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRGAP3O43295 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SRGAP3O43295 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
SRGAP3O43295 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SRGAP3O43295 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AP000756.2-201ENST00000624168 2567 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.2□□□□□ -1.58
SRGAP3O43295 SNORA51.2-201ENST00000364595 132 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SRGAP3O43295 SNORA69-201ENST00000383895 132 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 SNORA70C-201ENST00000384538 135 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AL122016.1-201ENST00000403365 367 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 RNU6-1068P-201ENST00000410958 103 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AC048351.1-201ENST00000420064 602 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 MTCO2P5-201ENST00000422621 426 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AL353678.1-201ENST00000422735 741 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AC019097.1-201ENST00000424783 735 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AL606489.2-201ENST00000433886 234 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.2□□□□□ -1.58
SRGAP3O43295 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 RPL23AP46-201ENST00000438548 490 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AL136380.1-201ENST00000447970 162 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 RPL37P3-201ENST00000456825 293 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AC026410.2-201ENST00000460281 156 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.2□□□□□ -1.58
SRGAP3O43295 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.2□□□□□ -1.58
SRGAP3O43295 RNU6-714P-201ENST00000516963 103 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 RNU6-835P-201ENST00000516974 104 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC008127.2-201ENST00000549925 1075 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.2□□□□□ -1.58
SRGAP3O43295 AL121655.1-201ENST00000605811 308 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 U6.101-201ENST00000637707 76 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC091046.3-201ENST00000631455 1574 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRGAP3O43295 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SRGAP3O43295 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.2□□□□□ -1.58
SRGAP3O43295 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 RPL23AP57-201ENST00000332361 466 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 RNU5E-1-201ENST00000362477 120 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 RPS4XP8-201ENST00000402039 771 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 RNU6-373P-201ENST00000411247 98 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 MTCO3P12-201ENST00000416718 547 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AL353729.1-201ENST00000425044 720 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 RPL35AP12-201ENST00000425362 338 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 OR4F13P-201ENST00000428478 931 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.19□□□□□ -1.58
SRGAP3O43295 ATP5JP1-201ENST00000431631 322 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 HMGB3P9-201ENST00000441799 583 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 GEMIN8P3-201ENST00000445417 720 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AL035551.1-201ENST00000446931 348 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AC002381.1-201ENST00000447049 280 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 HMGN3P1-201ENST00000453847 193 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 RNA5SP401-201ENST00000515920 127 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 COX6CP8-201ENST00000522620 226 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC055876.1-202ENST00000567053 138 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms