Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATP2A1O14983 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.92□□□□□ -1.78
ATP2A1O14983 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
ATP2A1O14983 PWAR6-201ENST00000552334 4618 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATP2A1O14983 RNU6-283P-201ENST00000364788 107 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 SNORD82-201ENST00000365530 70 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 RNU6-339P-201ENST00000384310 107 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 CYCSP45-201ENST00000402289 315 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AL355379.1-201ENST00000405542 640 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 CKS1BP5-201ENST00000434172 273 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 ARPC3P5-201ENST00000448802 534 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 RNU7-125P-201ENST00000458760 62 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC068305.1-201ENST00000497406 726 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.92□□□□□ -1.78
ATP2A1O14983 MTCO3P44-201ENST00000510977 541 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 NDUFB4P9-201ENST00000511646 388 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 RNA5SP216-201ENST00000516111 123 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 RNU6-678P-201ENST00000516832 109 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 RNU4-60P-201ENST00000517239 135 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 IGKV2D-36-201ENST00000518643 226 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC239860.2-201ENST00000525886 270 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC090888.1-201ENST00000561335 1141 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 MIR5004-201ENST00000579078 107 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC008088.1-201ENST00000580993 280 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC011471.1-201ENST00000585766 187 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC124312.4-201ENST00000605533 310 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC073968.1-201ENST00000618594 637 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC079228.1-201ENST00000624774 1049 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 AC007671.2-201ENST00000637344 619 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 AC068647.1-201ENST00000489539 2265 ntBASIC3.92□□□□□ -1.78
ATP2A1O14983 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATP2A1O14983 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
ATP2A1O14983 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ATP2A1O14983 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
ATP2A1O14983 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 MT-TC-201ENST00000387405 66 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 NDUFB4P4-201ENST00000404822 243 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 Z92545.1-201ENST00000411782 234 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 USP9YP26-201ENST00000421008 661 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AL512649.1-201ENST00000428997 581 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AC127537.2-201ENST00000439258 465 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.91□□□□□ -1.78
ATP2A1O14983 Z75741.1-201ENST00000446793 314 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AC092451.1-201ENST00000480211 153 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC090453.1-201ENST00000495560 436 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 RPF2P2-201ENST00000504693 896 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AC021146.1-201ENST00000511202 716 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 RNU6-232P-201ENST00000517144 64 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 OR4R3P-201ENST00000525084 838 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 MIR5680-201ENST00000577577 84 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 MIR4276-201ENST00000584832 70 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AL606834.2-201ENST00000602954 668 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AL355812.1-201ENST00000603215 216 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.91□□□□□ -1.78
ATP2A1O14983 AC024560.3-201ENST00000608482 349 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC072039.2-201ENST00000608883 439 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC004223.4-201ENST00000612426 332 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 AC018816.2-201ENST00000621460 353 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ATP2A1O14983 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ATP2A1O14983 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATP2A1O14983 RPS4XP5-202ENST00000449995 1334 ntBASIC3.91□□□□□ -1.78
ATP2A1O14983 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ATP2A1O14983 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.91□□□□□ -1.78
ATP2A1O14983 GABPAP-201ENST00000419271 1356 ntBASIC3.9□□□□□ -1.78
ATP2A1O14983 NUP58P1-201ENST00000502546 1738 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms