Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 MTND1P16-201ENST00000465177 898 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 DUXAP6-201ENST00000553858 601 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 OR4H12P-201ENST00000556269 907 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 BDH2P1-201ENST00000602288 736 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC013470.4-201ENST00000619978 986 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AL356585.4-201ENST00000623078 1229 ntBASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPIPA2E9PIF3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 SAR1AP2-201ENST00000392696 594 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL136116.1-201ENST00000403591 381 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 TIMM9P2-201ENST00000419324 266 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL137014.1-201ENST00000420490 1226 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 MTCO1P39-201ENST00000426148 480 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 USP9YP11-201ENST00000427537 717 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL590233.1-201ENST00000430017 456 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 HSPE1P28-201ENST00000443139 211 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 RPS29P31-201ENST00000446147 164 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL606517.1-201ENST00000446914 387 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 RPL21P134-201ENST00000453468 483 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 Z82190.1-201ENST00000454534 490 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC084357.1-201ENST00000473404 255 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 RPL7P38-201ENST00000488396 739 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC023424.2-201ENST00000493479 777 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 SETP7-201ENST00000552169 453 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 HSPE1P3-201ENST00000559254 309 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL512347.1-201ENST00000566420 503 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL160281.1-201ENST00000605307 311 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC004832.5-201ENST00000608677 401 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL050303.3-201ENST00000613704 284 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC006386.1-201ENST00000619436 415 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC109809.1-201ENST00000619665 545 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC004009.2-201ENST00000623016 728 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC231657.1-201ENST00000624313 397 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AP001002.2-201ENST00000625137 386 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 OR5BR1P-201ENST00000524992 1330 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
NPIPA2E9PIF3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 RNU4-92P-201ENST00000363783 136 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 SNORA38.1-201ENST00000364172 131 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 RNU6-173P-201ENST00000364215 104 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 SNORA72.3-201ENST00000365074 132 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 RNU1-101P-201ENST00000391171 127 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 RNU2-47P-201ENST00000410649 186 ntBASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA2E9PIF3 AC019178.2-201ENST00000423595 505 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms