Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AP000580.1-201ENST00000404439 358 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 CRIP1P1-201ENST00000427567 185 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC007679.3-201ENST00000434035 414 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 RPL12P39-201ENST00000455456 496 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC068228.1-201ENST00000461723 211 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 FTH1P2-201ENST00000466086 412 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC087385.1-201ENST00000475062 312 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 COX6B1P2-201ENST00000489624 230 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC025465.3-201ENST00000510570 311 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 RN7SKP277-201ENST00000516895 283 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 RN7SKP60-201ENST00000516985 239 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC011853.1-201ENST00000518911 454 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC107958.1-201ENST00000556576 290 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 MIR4273-201ENST00000582824 84 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC104763.2-201ENST00000604179 382 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC104695.2-201ENST00000605056 775 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 SDR42E1P2-201ENST00000614861 481 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC245014.3-201ENST00000618589 347 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 SDR42E1P4-201ENST00000620894 481 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 AC073593.1-201ENST00000624500 411 ntBASIC5.47□□□□□ -1.53
GPC6Q9Y625 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GPC6Q9Y625 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
GPC6Q9Y625 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.46□□□□□ -1.53
GPC6Q9Y625 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.46□□□□□ -1.53
GPC6Q9Y625 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
GPC6Q9Y625 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 COX6B1P3-201ENST00000312310 260 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RNU6-989P-201ENST00000362756 107 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 U3.7-201ENST00000363668 216 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 SNORD27-201ENST00000363981 72 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RNU6-1329P-201ENST00000365664 107 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 Y_RNA.577-201ENST00000384794 101 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 HSPE1P8-201ENST00000406997 288 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RPL31P2-201ENST00000413849 377 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RPL35AP3-201ENST00000414680 288 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 RPS4XP5-201ENST00000419038 768 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AL160275.3-201ENST00000423876 471 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC139712.2-201ENST00000424302 339 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AL133396.1-201ENST00000432048 687 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AL590664.1-201ENST00000448065 339 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 PPIAP27-201ENST00000453800 265 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 FO393415.2-201ENST00000480085 343 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC006539.1-201ENST00000481419 501 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 HIGD1AP3-201ENST00000515857 278 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RNU6-406P-201ENST00000516470 107 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RNU6-789P-201ENST00000517105 102 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RN7SKP35-201ENST00000517210 151 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 RN7SKP92-201ENST00000517266 244 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC090517.1-201ENST00000569307 266 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC093227.2-201ENST00000589357 285 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC012254.3-201ENST00000591183 2117 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 AC022400.9-201ENST00000623633 273 ntBASIC5.46□□□□□ -1.54
GPC6Q9Y625 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GPC6Q9Y625 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms