Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-335P-201ENST00000364563 113 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 RPS3AP26-201ENST00000398259 784 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 RPL21P32-201ENST00000419877 477 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 RPS7P2-201ENST00000435134 607 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 U73479.1-201ENST00000618062 168 ntBASIC2.49□□□□□ -2.01
SCN10AQ9Y5Y9 ZNF37BP-203ENST00000452306 1352 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 SNORD21-201ENST00000383953 95 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 RNU4-65P-201ENST00000410473 140 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 RN7SKP123-201ENST00000410732 291 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 NUP35P2-201ENST00000416748 943 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 MTCO3P4-201ENST00000419236 787 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 NEK4P1-201ENST00000433383 879 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 HMGB1P48-201ENST00000446155 598 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AL034418.1-201ENST00000448675 860 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 NF1P3-201ENST00000457709 450 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC092185.1-201ENST00000491371 97 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC008494.2-201ENST00000514544 370 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC103710.2-201ENST00000609912 942 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN10AQ9Y5Y9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RNU6-50P-201ENST00000362356 103 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RNA5SP391-201ENST00000363456 119 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RNU1-101P-201ENST00000391171 127 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 HMGB1P15-201ENST00000453854 435 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 HMGN2P16-201ENST00000456802 261 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 BNIP3P8-201ENST00000597863 560 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RNA5SP88-201ENST00000365560 109 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 ARPC3P2-201ENST00000457786 533 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC096992.1-201ENST00000459808 709 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC026412.2-201ENST00000512270 1075 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 OR4V1P-201ENST00000525394 1140 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC020923.1-201ENST00000624021 917 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC099063.3-201ENST00000642066 185 ntBASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN10AQ9Y5Y9 AC007256.1-201ENST00000392253 2765 ntBASIC2.46□□□□□ -2.01
SCN10AQ9Y5Y9 MTND5P27-201ENST00000428871 1720 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC073055.1-201ENST00000456901 1621 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-1293P-201ENST00000384077 107 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 RPL7P46-201ENST00000425129 740 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 RPS15AP28-201ENST00000435088 386 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 MUPP-201ENST00000438111 566 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 SYPL1P1-201ENST00000473622 768 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC110792.2-201ENST00000510278 224 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 HMGB1P41-201ENST00000520234 440 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 MTCO3P13-201ENST00000577757 781 ntBASIC2.46□□□□□ -2.02
SCN10AQ9Y5Y9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms