Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 RPS15AP11-201ENST00000594193 385 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AC106791.2-201ENST00000604680 391 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AL590282.1-201ENST00000610379 1136 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 VIS1.1-201ENST00000610517 203 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 VN1R74P-201ENST00000613259 503 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AC098657.3-201ENST00000620434 263 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 MIR6132-201ENST00000622083 109 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AL031601.2-202ENST00000622650 282 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AC016542.2-201ENST00000624201 619 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 AC092159.4-201ENST00000624944 550 ntBASIC1.52□□□□□ -2.17
UBE2D4Q9Y2X8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 SNORA80A-201ENST00000363922 136 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 RNU1-52P-201ENST00000384190 164 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AL031679.1-201ENST00000400616 525 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 NUP35P1-201ENST00000422734 947 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 PSMA2P3-201ENST00000429685 675 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 RPL23AP7-203ENST00000449021 469 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AL021397.1-201ENST00000451806 248 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 GAPDHP39-201ENST00000481866 979 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 RN7SL636P-201ENST00000497504 294 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC113155.1-201ENST00000511141 769 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC010486.1-201ENST00000511793 424 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 RNA5SP200-201ENST00000516360 103 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 MIR514B-201ENST00000516774 80 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 CIR1P1-201ENST00000524055 1133 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 NDUFS5P6-201ENST00000529136 295 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 RPS3AP23-202ENST00000574601 686 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC022069.1-201ENST00000582910 658 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 MIR5002-201ENST00000584713 97 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC096586.2-201ENST00000610260 441 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 AL359851.1-201ENST00000569460 4997 ntBASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBE2D4Q9Y2X8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 RNU6-1181P-201ENST00000384191 106 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 MIR221-201ENST00000385135 110 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AL355497.1-201ENST00000406262 551 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 MTCO3P30-201ENST00000426425 670 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 MYL8P-204ENST00000431574 518 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AL109933.2-201ENST00000452651 260 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 RPS23P3-201ENST00000470993 430 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC004924.1-201ENST00000480160 781 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AL049873.1-201ENST00000480540 376 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 RPS27P21-201ENST00000486977 252 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 RPS15AP34-201ENST00000487776 387 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC008427.1-201ENST00000503102 655 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC008413.1-201ENST00000511864 177 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC009127.3-201ENST00000570531 403 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 MIR4435-1-201ENST00000582552 80 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC245884.12-201ENST00000615364 59 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC009090.3-201ENST00000616553 565 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.5□□□□□ -2.17
UBE2D4Q9Y2X8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 AC090740.1-201ENST00000623193 2262 ntBASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 Y_RNA.111-201ENST00000363248 100 ntBASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 RNA5SP138-201ENST00000365098 114 ntBASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 RPS4XP8-201ENST00000402039 771 ntBASIC1.49□□□□□ -2.17
UBE2D4Q9Y2X8 AC073264.1-201ENST00000411508 416 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms