Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 RN7SKP128-201ENST00000364270 303 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 RNU6-213P-201ENST00000384051 104 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 Y_RNA.525-201ENST00000384570 113 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AL355433.1-201ENST00000422804 300 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 GSTA6P-201ENST00000424144 582 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AL451062.2-201ENST00000427515 271 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 PFN1P11-201ENST00000445829 389 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC002553.3-201ENST00000453002 341 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 ACA64.1-201ENST00000459171 127 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 RPL21P126-201ENST00000470049 478 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 SNRPCP2-201ENST00000504370 475 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC083906.1-201ENST00000509298 406 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC146944.3-201ENST00000509969 371 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 AP001340.1-201ENST00000624405 217 ntBASIC6.25□□□□□ -1.41
LHX6Q9UPM6 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX6Q9UPM6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 CYP2G2P-201ENST00000594920 1485 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RNU6-1272P-201ENST00000362776 107 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RNU6-961P-201ENST00000363893 105 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 SNORD73B-201ENST00000364394 72 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 Y_RNA.337-201ENST00000365312 102 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RNU6-395P-201ENST00000365662 106 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RNA5SP474-201ENST00000391234 90 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 CYB5AP4-201ENST00000396692 399 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AC013442.1-201ENST00000397347 228 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AC244452.1-201ENST00000413798 141 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AL121916.1-201ENST00000429405 308 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AC005154.2-201ENST00000438110 379 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AP000870.1-201ENST00000472927 406 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RPL21P13-201ENST00000488305 481 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 NDUFA5P6-201ENST00000542110 379 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AC005476.1-201ENST00000554427 397 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AL157871.3-201ENST00000557231 293 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 MIR3135A-201ENST00000578460 77 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AL352984.2-201ENST00000611153 546 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AL161629.2-201ENST00000615347 275 ntBASIC6.24□□□□□ -1.41
LHX6Q9UPM6 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LHX6Q9UPM6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms