Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AL845331.3-202ENST00000562856 261 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC090425.2-201ENST00000608818 501 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC010975.3-201ENST00000618727 978 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC010608.3-201ENST00000625048 527 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC026634.1-201ENST00000634369 198 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC099654.9-201ENST00000637055 678 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC116096.1-201ENST00000566804 2314 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC138915.3-201ENST00000562908 1389 ntBASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN1Q9UMX0 AC091152.2-201ENST00000591628 2569 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 SNORD65.1-201ENST00000390889 71 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AP000567.1-201ENST00000406413 156 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 LUZP4P1-201ENST00000415420 344 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AL449283.1-202ENST00000418249 604 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 RPL21P66-201ENST00000426566 466 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 MTCO1P3-201ENST00000429327 192 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 HMGB1P12-201ENST00000438594 598 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC079776.3-201ENST00000450665 370 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC104164.3-201ENST00000467363 1258 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 VPS26AP1-201ENST00000483197 979 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC079203.1-201ENST00000487972 404 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 BOLA3P3-201ENST00000505182 232 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC113420.1-201ENST00000507903 571 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 RNA5SP367-201ENST00000516557 118 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC021451.1-201ENST00000523498 1129 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AP001317.1-201ENST00000531194 960 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 LRRC6P1-201ENST00000532188 885 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC011458.1-201ENST00000604034 617 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AL138478.1-201ENST00000612252 832 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AL121895.2-201ENST00000619558 447 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 AC005183.1-201ENST00000603687 1979 ntBASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN1Q9UMX0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC130650.2-201ENST00000618736 2403 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RNU6-629P-201ENST00000384061 103 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 DUTP6-201ENST00000425573 462 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC069528.1-202ENST00000482888 637 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC084024.2-201ENST00000503480 791 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 RNU1-103P-201ENST00000516502 125 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 SCARNA1-201ENST00000517138 166 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 SULT1C2P1-202ENST00000562418 459 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC006504.3-201ENST00000586818 523 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AC006023.2-201ENST00000609916 167 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 PART1_2.1-201ENST00000612397 250 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 OR1S1-201ENST00000624470 978 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 AP005901.5-201ENST00000545779 1796 ntBASIC3.09□□□□□ -1.91
UBQLN1Q9UMX0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
UBQLN1Q9UMX0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
UBQLN1Q9UMX0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.09□□□□□ -1.92
UBQLN1Q9UMX0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
UBQLN1Q9UMX0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms