Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 RPL7P31-201ENST00000450192 724 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC022447.3-201ENST00000506865 495 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC010486.1-201ENST00000511793 424 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 Y_RNA.711-201ENST00000516993 102 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AP001893.2-201ENST00000526949 202 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC233280.2-201ENST00000603917 1070 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CTHRC1P1-201ENST00000605383 469 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC092650.2-201ENST00000619984 902 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 MTND5P27-201ENST00000428871 1720 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 DBF4P1-201ENST00000412976 1892 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 Y_RNA.72-201ENST00000362894 103 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 RNU5E-8P-201ENST00000363502 116 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 SNORA63.7-201ENST00000365579 123 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 RNU6-639P-201ENST00000384074 107 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 U1.1-201ENST00000384101 164 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL354719.1-201ENST00000406535 843 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC009302.1-201ENST00000417147 390 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 RPL23AP4-201ENST00000427757 463 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 SKP1P3-201ENST00000429280 487 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 SDCBPP1-201ENST00000440192 890 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL133162.1-201ENST00000463228 453 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 FTH1P9-201ENST00000513251 355 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AP001004.1-201ENST00000582468 324 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC090312.2-201ENST00000582687 378 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC244505.7-201ENST00000599675 272 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 CDR1-202ENST00000625883 1485 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AC245100.2-201ENST00000454544 1679 ntBASIC6.19□□□□□ -1.42
COL17A1Q9UMD9 AL118496.1-201ENST00000440201 1812 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 Y_RNA.296-201ENST00000364930 108 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 RNU6-483P-201ENST00000384088 108 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 RNU6-98P-201ENST00000384173 107 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AMD1P2-201ENST00000412936 992 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 OR51A3P-201ENST00000413596 924 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 Z93242.1-201ENST00000427102 353 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 RPL23AP50-201ENST00000434149 455 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 SNRPEP4-201ENST00000435815 279 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 Y_RNA.631-201ENST00000459607 101 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 RPS29P19-201ENST00000479709 171 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 RN7SKP31-201ENST00000516354 278 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC020914.6-201ENST00000594327 272 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC091925.1-201ENST00000623204 462 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC007546.2-201ENST00000623996 360 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.18□□□□□ -1.42
COL17A1Q9UMD9 AC068870.3-201ENST00000625077 2536 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms