Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.15□□□□□ -1.91
CDH9Q9ULB4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RNU6-492P-201ENST00000363035 104 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RNU5B-4P-201ENST00000363508 111 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC016769.3-201ENST00000396562 315 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC019070.1-201ENST00000415008 1024 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 OR2AS1P-201ENST00000427827 319 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC012497.1-201ENST00000429392 575 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RPL17P49-201ENST00000443728 411 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 KLRA1P-201ENST00000503499 986 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 MLLT10P2-201ENST00000506434 249 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 KLHL2P1-201ENST00000508691 521 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 SNORA31.8-201ENST00000516327 108 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 RNU6-711P-201ENST00000517255 106 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC090502.2-201ENST00000549267 280 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 BDH2P1-201ENST00000602288 736 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AP001330.4-201ENST00000604350 154 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC010738.1-201ENST00000604970 987 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC092954.1-201ENST00000609121 445 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC080188.3-201ENST00000624842 748 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 CYP3A51P-201ENST00000633513 256 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 AC096644.4-201ENST00000563417 2912 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDH9Q9ULB4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.14□□□□□ -1.91
CDH9Q9ULB4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 RNU6-657P-201ENST00000383904 107 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 RPL7P8-201ENST00000411964 730 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC245054.2-201ENST00000415639 319 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 OR4K6P-201ENST00000416478 897 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC012498.1-201ENST00000424037 437 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC092634.2-201ENST00000428146 1010 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 MTND4LP10-201ENST00000435146 291 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC092393.1-201ENST00000439625 742 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC244505.3-201ENST00000454598 187 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC013828.1-201ENST00000481845 158 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC093801.2-201ENST00000503966 1050 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC034268.2-201ENST00000571784 482 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 VN1R92P-201ENST00000598511 928 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 AC018926.1-201ENST00000616335 435 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.13□□□□□ -1.91
CDH9Q9ULB4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CDH9Q9ULB4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 SNORA9.2-201ENST00000365361 133 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 SUGT1P1-201ENST00000379514 476 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 SNORD51-201ENST00000384320 80 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 ARF4P3-201ENST00000397387 509 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RNU2-28P-201ENST00000410457 189 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 RPL21P32-201ENST00000419877 477 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 COTL1P1-201ENST00000422309 375 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 UBE2V1P6-201ENST00000430840 422 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
CDH9Q9ULB4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH9Q9ULB4 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms