Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 Y_RNA.194-201ENST00000363985 102 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 RPS26P8-201ENST00000393490 348 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 SPA17P1-201ENST00000416656 452 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL139095.3-201ENST00000419672 1203 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL031667.1-201ENST00000440222 725 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL162389.1-201ENST00000449233 177 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC005008.1-201ENST00000456151 612 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 CFTRP1-201ENST00000456646 183 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC108860.1-201ENST00000484521 383 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC104164.2-201ENST00000496953 495 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 RNA5SP468-201ENST00000516782 93 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 MIR2116-201ENST00000517221 80 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 RN7SKP289-201ENST00000517244 295 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC107934.1-201ENST00000522215 217 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 ERHP1-201ENST00000523006 310 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AP003181.2-201ENST00000528941 181 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 DEFB108A-201ENST00000530110 222 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 MIR3611-201ENST00000584484 83 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 BDH2P1-201ENST00000602288 736 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC245517.5-201ENST00000611529 162 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC091304.9-201ENST00000612091 226 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC008250.2-201ENST00000615261 205 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 uc_338.12-201ENST00000616344 181 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AC092104.1-201ENST00000497346 1441 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 AL158163.1-201ENST00000603915 1649 ntBASIC4.02□□□□□ -1.77
LRFN1Q9P244 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN1Q9P244 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN1Q9P244 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 MIR383-201ENST00000362257 73 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 RNU6-348P-201ENST00000384386 107 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC007899.1-201ENST00000412776 775 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN1Q9P244 HMGB1P12-201ENST00000438594 598 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 RPL23AP52-201ENST00000439311 478 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC114755.5-201ENST00000447760 831 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 MTND1P27-201ENST00000451117 902 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 MTND1P12-201ENST00000455231 147 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 RPL21P129-201ENST00000491732 478 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC108475.1-201ENST00000507880 950 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC109464.2-201ENST00000510242 943 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 Y_RNA.672-201ENST00000516289 104 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC008489.1-201ENST00000524271 483 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 TVP23BP1-201ENST00000557500 617 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC006116.10-201ENST00000591836 581 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC090425.2-201ENST00000608818 501 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC109347.2-201ENST00000610220 349 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC015813.4-201ENST00000610469 179 ntBASIC4.01□□□□□ -1.77
LRFN1Q9P244 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN1Q9P244 TUG1_2.1-201ENST00000614234 87 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms