Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 GABPAP-201ENST00000419271 1356 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 Y_RNA.5-201ENST00000362334 102 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 Y_RNA.135-201ENST00000363439 95 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 RNU6-1284P-201ENST00000363701 100 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 RNU6-310P-201ENST00000384655 107 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 RNU6-754P-201ENST00000391166 107 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AL645733.1-201ENST00000402250 217 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AL391417.1-201ENST00000404100 426 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 RN7SKP125-201ENST00000410481 302 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC016769.2-201ENST00000414815 475 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SCARNA18-201ENST00000459004 134 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC116533.1-201ENST00000459748 321 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC135721.1-201ENST00000497954 479 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 MTND4LP22-201ENST00000508209 276 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC016065.2-201ENST00000514530 444 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AL671862.1-201ENST00000515851 349 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 RN7SKP260-201ENST00000516907 149 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AP000676.2-201ENST00000529711 301 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC008269.2-201ENST00000561915 1105 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 MIR4646-201ENST00000580775 63 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC006272.2-201ENST00000594725 163 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 AL355598.1-201ENST00000604169 202 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 AC010378.1-201ENST00000619270 362 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 MIR6730-201ENST00000622213 67 ntBASIC5.57□□□□□ -1.52
CNTN3Q9P232 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 IQCB2P-201ENST00000401788 1633 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 RNU6-188P-201ENST00000364207 107 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 RNA5SP241-201ENST00000391326 114 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC009310.1-201ENST00000414414 451 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 MCFD2P1-201ENST00000417812 300 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 PDSS1P1-201ENST00000422953 1114 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 RAC1P6-201ENST00000423911 575 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 RPL12P3-201ENST00000440080 396 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC097473.1-201ENST00000508142 408 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 RNU6-764P-201ENST00000516396 105 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 RANP9-201ENST00000519957 271 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC100870.1-201ENST00000522035 505 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 SETP7-201ENST00000552169 453 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC068446.3-201ENST00000555285 382 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 RN7SL290P-201ENST00000578661 300 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AL451044.1-201ENST00000604867 238 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC011373.1-201ENST00000607270 237 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AL138726.1-201ENST00000614873 333 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 Z69720.2-201ENST00000624755 279 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC091925.2-201ENST00000625059 256 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC011755.1-201ENST00000623763 2049 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms