Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC107294.3-201ENST00000609211 526 ntBASIC3.64□□□□□ -1.83
HMG20BQ9P0W2 AL137790.1-201ENST00000634283 177 ntBASIC3.64□□□□□ -1.83
HMG20BQ9P0W2 AC000403.1-201ENST00000613696 3585 ntBASIC3.64□□□□□ -1.83
HMG20BQ9P0W2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMG20BQ9P0W2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMG20BQ9P0W2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 COTL1P1-201ENST00000422309 375 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 HMGN2P20-201ENST00000437531 273 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC107083.1-201ENST00000439643 279 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AL831737.1-201ENST00000441288 271 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC092757.1-201ENST00000467293 467 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC096576.1-201ENST00000489014 359 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC097462.2-201ENST00000504623 481 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 SCARNA13-201ENST00000516672 275 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 PDCL2P2-201ENST00000533651 189 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC087481.2-201ENST00000565492 330 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AL035411.2-201ENST00000604022 421 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC091946.2-201ENST00000606105 291 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC092650.2-201ENST00000619984 902 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 CYP3A51P-201ENST00000633513 256 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC093831.2-201ENST00000624393 3427 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 AC244517.1-201ENST00000606030 2086 ntBASIC3.63□□□□□ -1.83
HMG20BQ9P0W2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 RNU6-50P-201ENST00000362356 103 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 SNORD65.1-201ENST00000390889 71 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 MTCO1P56-201ENST00000401674 224 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 RNU6-712P-201ENST00000410558 100 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 VN1R10P-201ENST00000447106 875 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 RPS27AP1-201ENST00000475545 471 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC079203.1-201ENST00000487972 404 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 OR4G11P-201ENST00000492842 939 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 KLRA1P-201ENST00000503499 986 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 RNU1-103P-201ENST00000516502 125 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC027309.2-201ENST00000520566 192 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AL389895.1-201ENST00000554127 252 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC013437.2-201ENST00000639587 677 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 AC005183.1-201ENST00000603687 1979 ntBASIC3.62□□□□□ -1.83
HMG20BQ9P0W2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 NEK4P1-201ENST00000433383 879 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC025750.2-201ENST00000442609 450 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC079776.3-201ENST00000450665 370 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC069528.1-202ENST00000482888 637 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 RN7SL633P-201ENST00000488974 297 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 OR5G4P-201ENST00000525251 760 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC138915.2-201ENST00000569776 97 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 MIR4474-201ENST00000579189 78 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC112220.2-201ENST00000605513 533 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AP001521.1-201ENST00000609150 300 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AC018645.2-201ENST00000609151 472 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 VIS1.1-201ENST00000610517 203 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 AL645568.2-201ENST00000432815 1337 ntBASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms